K21003

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21003

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
root (PO:0009005)
  • present in greater numbers in organism (PATO:0000470)
    (Root::Number::many)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21003

Determination of introduced cDNA(s)

  • J013146J22 - Rice Full-length cDNAs - Original: J013146J22

    full reading [+] show sequence

    Nucleotide sequence: J013146J22 - full reading 
    GTAAGCAAAG CATCTCGCGC CCTAGCCAAG CCAGCCATGG CGCCGTCGTC 
    GAGGAAAGAG AGGGCGGCGG AGGCGAGGGC GAGCACCTCC AAGCCGTCTC 
    CTGCGCCGGC CCCGGCGCCG GCGGTCCAGG TGCAGCGGCG GCCGGTGGGC 
    GGGGGCCGGT GGACGAGCCG CCGGATATCG TTCTACGCCT CCCGCGCCTT 
    CTTCCTCCTC ATCATCCTCC AGATCCCGCT CTTCAGGGTC CCTTGTAGAG 
    CAGGCACATG CACAACGCCC ATTCAAGTTA CATCTTCGCA GTTGGTCTCA 
    AATGAGATAT TCCCACCATC TGTTGTGAAA GCCCTTCTCT TCCCTGGGGC 
    TATAGCAAGC AACCTTACTA AGAGCATGAC ATTTCCTAGG TGGAATGACC 
    TGTTTGATAT TTACAATTTG ACAGATGCCA AGACCGCTTC AGCAGTAATT 
    GATCTCCAGC GTCTAGAGAT TCTTGCTGGA AGCTACTTCT GTGCTGCTGG 
    AGCACTTGTT GGTGTCATAA ACCCTGGGAG GATGACCTTG TTTGGTACCC 
    TTTTGGTTAT CTGGGGTCTA GTGAAAGAAG CGCTCTTTGG GAAACCGGTG 
    AACAGTGATC CAACACAATC AGTTCATGTT TATCCGACCA TTTTAATTGC 
    ACTGATTTGT GCATTCTTGT CAATAACTTA CAATGTAAAG AAGACAGTAA 
    GAAATAGTCA GTCTGTTTCA ATCACTAAGC CTCTGCAAAG TTCTGCCAAG 
    TCGAAACTGA AGTAGACACT TCATTGTCTA TTTGCCCCTT CATCCTTGTA 
    GTTCATTTCC ACAAATTTAT TGTTGAAGAC TGGCCCAAAG GATAACACTA 
    CTGTGGTTCT TGTGTACCAC TTTGAATACT GTAACCTTCA GTTTTCACCT 
    TTGTATCAAA GACTTATATC TATAACTTTT ATTGCAAGCA TATTCACTTT

    Gene models with high sequence identity

    1. AT5G11280.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); ...
      E-value: 3e-62; Score: 235.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G11280.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR