K21012

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21012

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21012

Determination of introduced cDNA(s)

  • J023028L03 - Rice Full-length cDNAs - Original: J023028L03

    full reading [+] show sequence

    Nucleotide sequence: J023028L03 - full reading 
    GGAGCCCTCC AAATTCCCAA GGCGGGCCTC GAGTCGAGCC CAAACCCCTT 
    CGCCGCCCCG CCATGCAGTT CCCCTTCGCC GCCGGCGATT ACCCCGCCGA 
    CCAGGTCGAC CCCGACTACC TCTACTTCCT CCGCCACATC CGCCCCGATG 
    GCGACTCCTA CACCCTCGAG CTCCCCTCCG ATGGCGTCTC CCCTCCTTCC 
    CTCGTGAAGT ACGAGGCCCC CGCCGACACC GGCAGCACCG ACGGCGAGTG 
    CGTCTCCGAT CCCTCCCCTG GCCGCGCCAG CACCAACCGC CCGCCGGAGG 
    AGAAGGAGTC GTCGGTGGAG GTGGACGCCG AGCCTCCTGC CCCCTCCTGG 
    ATCGACTCCC TCGTCGACAT CGACGAGGAC TACCGCCTCT TCCTCAAGCA 
    CACGCGCGTG GTGAACGACA ACATGGTGCT CGAGATTGAC GGCGCCGTCG 
    TCACCTACCC GTGCGCCGCG TCCTCCGAGA GCAGCAGCGA GGTCGAGGAT 
    GCGCGGGAGA AAGAGGTGGC CATGGATTCA GACGAGCCGG TGGTAATTCT 
    TCCGGACCCA AAAGTATGCG ACTGGGTGGC GGTGGGTGAC GCATCCGTGC 
    GAACATTAGA TAGTAAGAAG AAGAGGAAGA TGAGTTCAAG CAATTCCAAT 
    AATGCCGGCC CTTCCATCCC CCCGGGGTCA CAAGGTGTTA TATGGCCGGC 
    ACATATCAAC AGTAGACCGG ATTCAGATTT CAAGCAGAGG TTATTGGATG 
    CTCTCAGCAA ACCATTTAGT CGAAAAGAAT ATATTAAGCT ATTTGACATG 
    GCTTCTATTC GTACACCATT AGTAAAATTA CGGCAGGTGC GCAATGATGT 
    AAAGTTCTAC CCTACACAGG AAATGGGAAA TTCATACTTT GATCATTACC 
    CAGATCTCGT TGACCAAGTT ATGCACACTA GCTTTCCAAA TGGTTTAGCT 
    CTGATGCGTG GGTTTTTCTT CTGGTTGCAG AATAATGCAC ATGAAGATCA 
    ATTCAGGCCA TGGGTTGATG TTTCTAAAGA CCACGAGGTT ATTCCTTTGA 
    TCGATTGAGA TTTACACATT GCAGCTGGTC AAACCCTCAA GTCCAAAACA 
    TTAAACATCT ATTTGCGGGA ATGACTCTCT TAAGGGTGAC GTAATGTCAT 
    CAGCAGAGAT TGTCTCGTAT CTATATGGAA TGAGATAAAT AAATATATTG 
    CCAATGATCG AGAAATAATT CCCTATTGGA ATATGCGCAC ATCCTCTTTG 
    CAAATAATTT AACATTGAGT TTTGCCTGTG AATTTGAGGG CTGGATTCCA 
    TGTTCTACCT GATCTCACCA TCATAAAGCA ATAAAGCAGT GGTGTTATTT 
    C

    Gene models with high sequence identity

    1. AT1G77270.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); ...
      E-value: 5e-14; Score: 76.30

     

    InterPro Scan Digest

    See the detailed result >

    AT1G77270.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits to 388 proteins in 92 species: Archae - 0; Bacteria - 31; Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR