K21120

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21120

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21120

Determination of introduced cDNA(s)

  • J023006H21 - Rice Full-length cDNAs - Original: J023006H21

    full reading [+] show sequence

    Nucleotide sequence: J023006H21 - full reading 
    GACTCCTCTC CCACCATCAT TCACAGCCGT GCTTCGCTCC TCCAAACCCA 
    AAAAATTTCT CCTGCTTTTG TTTCCTGCAC ACCGGCTAGA TCTCGCCAAG 
    AACTCGGTAA TCCCAAGCCC TGGGTGAGTG AGATCCAGCT TCGCAAGAAG 
    GTTTTGGGGG TTCTTGGGCA GTTCTGCCAG GAGAGTGACA CTGGATGATT 
    GCATAAATGA AGCTTGCTGA ATGTAGATTG TGAAGTTCTC CTTTCCTGCG 
    TACGGCCATA TACACTTTTA TCATGGCACC GCGCAACAGG TCTTCAGCTA 
    GAAGGCCTCT CTGGATTGTC ATCTTGATTG CTTTTGTCTG TGCAGTAGGC 
    ATTGGAGCCT ATCTTTATAC ACCCCAGCAT TACACACCTT GTTACTTGGT 
    GTCATCAAAT TCCTGTAGTT CTCGGCCTCC TCCAGAACCT GCTAGGGTTT 
    ACACTGATGA TGAGATTGCT GCTCGTATTG TCGTAAGAGA TATCATTTTG 
    GCACAGCCAG TTCAGTCAAA GAATCCAAAA ATTGCTTTCA TGTTCTTGAC 
    ACCCAGTTCA TTGCCATTCG AGAAGCTTTG GGAAAAGTTC TTCATGGGGC 
    ATGAAGACAG ATATACCATA TATGTACATG CATCAAGAGA AAGGCCTGTT 
    CACGCTAGTC CGATATTTAA TGGCAGAGAT ATTCGAAGTG AAAAGGTAGT 
    CTGGGGCACA ATTTCAATGA TTGATGCAGA GAGGAGGCTT TTGGCTAATG 
    CACTGCAAGA TCCTGATAAC CAGCATTTTG TCTTGCTCTC TGAGAGCTGT 
    GTACCACTTC ATAACTTTGA TTATGTATAT AGCTATCTTA TGGAAACAAA 
    TATCAGCTTT GTTGACTGTT TTGACGATCC TGGTCCACAT GGAGCAGGCA 
    GATATTCTGA TCATATGCTA CCTGAAATTG TTAAGAGAGA TTGGAGAAAA 
    GGTGCACAGT GGTTCACAGT GAAACGTCAG CATGCAGTTC TTATTCTTTC 
    CGATTTCCTT TACTATGCAA AGTTCAAGCG GTACTGTAAG CCGGGAAACG 
    AATGGCATAA CTGCTATTCT GATGAACACT ATTTGCCAAC CCTCTTTAAT 
    ATGGTTGATC CAACTGGAAT TGCAAATTGG TCAGTGACAC ATGTTGATTG 
    GTCTGAAGGA AAATGGCATC CTAAAGCTTA CAGGGCTGTT GACACAAGCT 
    TTGAACTGCT TAAGAATATT TCGTCCATTG ATGAGAGTAT TCATGTTACA 
    AGCAATGCAA AGCACCAAGT GATGAGAAGA CCGTGCCTAT GGAATGGCAT 
    GAAGAGGCCT TGCTACCTAT TTGCACGGAA ATTCTATCCC GAGGCACTCG 
    ACAATCTGAT GAACATTTTC TCAAACTTCA CTATCATCTA AGGGAAGGAT 
    GAATCAAAAA CCTAGTTTGC ATGTAACACT ACAGTATAGG CCTTGGAAAA 
    TCAGAAACCC AGAGAGACTC GCTGAATTGT TTTTTGTGAT CTCTCTTGGA 
    ACATCAAATG ATTTTCCTTT TTCGCGAAGA TGTTGCATGG TTTGCAGTTG 
    AAAGAGCAGT CAAATTTGTT CCCC

    Gene models with high sequence identity

    1. AT4G30060.1 [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
      E-value: 2e-134; Score: 476.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G30060.1

    Model type
    Protein coding
    Short Description
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Computational Description
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT2G19160.1); Has 603 Blast hits to 603 proteins in 26 species: Archae - 0; Bacteria - 17; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR