K21137

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21137

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
root (PO:0009005)
  • present in greater numbers in organism (PATO:0000470)
    (Root::Number::many)
flower (PO:0009046)
  • abnormal (PATO:0000460)
    (Flower::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21137

Determination of introduced cDNA(s)

  • J013124K11 - Rice Full-length cDNAs - Original: J013124K11

    full reading [+] show sequence

    Nucleotide sequence: J013124K11 - full reading 
    GGTCCTTTTA TTCCAACCCT CACCGCCCCA CGATTCACGC CACCACCACT 
    CCGTCCGTCG TCTCGTCTCG TCGCCTACCT AGGGTTTCGT GTTTGGGAGA 
    TCTGAGAGGG GGAGGGGGAT GGAGGTGAGG GAGATGGCCG TGGCGGCGGC 
    TGCGGCGGCG GCGGCGTCGT CCGGGGGAGG AGGTGGGGGG TTGAGGATGC 
    CGCCGCCCAA CCCTAACCTG CCGTACAGGG AGGATTGCTG GAGCGAGGGC 
    GAGACGGAGG CGCTGGTCCG CGCGTGGGGG AGCCGCTACG TCGAGCTCAA 
    CCGGGGGAAC CTGCGGCAGA AGCAGTGGCA GGAGGTGGCC GACGCCGTCA 
    ACTCGCGGCG CGGGGCGGCC GCGCGCCGCC GCCCGCCGCG CACCGACGTG 
    CAGTGCAAGA ACCGCGTCGA CACCCTCAAG AAGAAGTACA AGGCGGAGCG 
    CGCCCGCGTC ATGCCATCCA CCTGGTCCTT CTTCCCCGAG CTCGACCGCC 
    TCGTCGGGCC CACCCTCTCC GCCTCCGCCT CCAAGAGGCC CTCGCCGTCG 
    CCGTCGCCGG TGCCGCCGCC CCCTTACTTC GCCATGCCCA TCCATCCTTC 
    CGCGGTGAGG AAGCCCCCCT CGCCTTCGCC GTCGCCCTCT CCGCCGCCTC 
    CTATGGCGTT GCCGCTGCCC AGCTACCGTC GCGGGTCTCC GCTCCCCGCC 
    GCCGCTCTTA TCCAGCAGGA GGCCGCGGCT GCAGCCGCTG CCGCGGTGTC 
    TGATTCGGAG GACTCTGAAG GCCCTGGCGA TAACAACAAT CACAACGCGC 
    AGCGGTCACC GTCGCAATCT GTGTCATCGC GCTCCGGCAA TAGCAACAAG 
    CGCAGCCGTC AGGAAGTTGA TGGTGGTTTC AGGGAGCTGG CAAGGGCGAT 
    CGAGGCATTT GCGGAGATGT ATGAGCGTGT GGAGAGTGCG AAGCAAAAGC 
    AGGCACTGGA GATTGAGCGG CAGCGAATAG ACTTCCTGAA GCAGTTGGAG 
    GTCAAGCGCA TGGAGAACTT TGTGGATGCA CATGTCAAGC TTGCCAGGGC 
    AAAGCGCATC AAGAAGCATG CAGGGACTGC ACCCGATGGT ATTGGCGCAG 
    CGGAATTGGT TTCCTCTGTC GCTGCGCTGC CTTTCCTCTC CACCTCCACC 
    TACATATGAT GCTGAGGAGA TGTTGAGATT ATCAGTGTGA AGTTCATTAG 
    ATGGCCTTGC TGACCATGGG AAGACTGGTT TGGCACTTGG CAGCGATTCA 
    TTGTAGTTCG TAGCCTGGTA GTATATGGAA ATTGAAGACT AGAAGTTCCT 
    AGTGTAAAGC AATGTTGACA TTGGTGCCTG TGGGTTGTTA ATCTGTTTAC 
    CTATTGTTTT ATTGACATTT TAGGCATGTA ACTCTGACCT CCTGTTTTAT 
    TTTTCTTTCT TAAAAAAAAG TGTATCGACA AAAGGTGTTG C

    Gene models with high sequence identity

    1. AT5G05550.2 [+] show detail - sequence-specific DNA binding transcription factors
      E-value: 1e-27; Score: 121.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G05550.2

    Model type
    Protein coding
    Short Description
    sequence-specific DNA binding transcription factors
    Computational Description
    sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR