K21145

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21145

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21145

Determination of introduced cDNA(s)

  • J033116J22 - Rice Full-length cDNAs - Original: J033116J22

    full reading [+] show sequence

    Nucleotide sequence: J033116J22 - full reading 
    GATTGCAAAA CAAGCTCAAG TTTTCAACAA CGTAATGGCT CACAGCTTAC 
    CTCTTGATGT ATGGGGTTGG ATCACCAACC TGCCTCCGTT CTCCCAATGG 
    CGCTCCAACG CCATGTCCCT TTGCATCTGC CCCACACCAT CAGCATCAGA 
    ATCATCACAG CCATCGTTGA ACCTATCAGT TGTCAAAACC CCTCCCACCC 
    AGCCCTCCTT TGTCACCTTC TCCATCTTTG CAAATTACCG TGTGCCAATT 
    TCTCTGTGGA CGTCAAAACC AGTCCACCTG AAATCATACA CCCAGCAGTC 
    TCTAGACGAA CAAGAGATGT TAGAGTTGTT TGTTGACATT GTGGACTGGG 
    TCCTGAGATC CGGACCAAAC AAAAAGCTGT CCTTTCAGTT TCCCAGGGCA 
    CAGATTCATG GCAATCTAAA GGACGTGTTT AACATAGTTT TCTTGTCCCT 
    GGCCTTCCTA GTTTGCATCT ATGAGGCTCC CCATGCTCTT CGCTGTCGAT 
    GCCTCGAATC CCTGAGGACT CAGCTGACTG GGCCAAAGTG CAAAGATGCT 
    GCAAAGACCT TTGTCAGAAT GTTGGGAGCA AACCTTGAGG AGCAATGGAT 
    GCAGACAATG AATCTTGCAG TGACTAACTG GATTGTTGAG CAACGATCCT 
    CACACCATTC ATTTGGGGTG CCATCGCCAC TGTTCTCATA TGCTCTTTCA 
    GCAAGTGGGC TCTGGAAGGT CCAGCTATAC TGCCCACTCA TTGCCATGAG 
    CATGGAAGAT CCTGCAGTGC CAACACAGGA TGAGCGCCTT CTCTTCTCGC 
    TTACTTATCA GCAACTTGAA GGTGTGATTC AGCTCGCCTA CAAAACAATC 
    AGAAGGGACA ACTGGATTGA TGTGAGATAA AGGTGGACAA CATAAGGTGT 
    GATGTGGACT CTTTGGTCTC CGAGATCCTC ATGACTGAAC GTGGACATGG 
    CTCTGAGGAG AAGCACTTTC CATCACGTGT TATGCTGCAA ATCACACCTA 
    TGCAACAATC AGATGTCCTG TCGGTTTCAG TCAGCAAGTC CTCCGACAAC 
    CCCACGCATG AGTTTGGCCT TGAGAAGGGC ATTGAAGGTT CATTCGACCC 
    CCCAAACACA TTTGGACTAA AGGCATCGGT CAGCGAAAGC CTCACACTGA 
    CCATGAAACC CTGGAAATTT GAACAGTCTG TGCATGGAAA CACTACAACC 
    TTGAACTGGT TTCTCCATGA TGGTGTAAAC GGAAGGGAGG TTTATTCTTC 
    AAAGCCTTCC AAGCTCTCCC TGCTTCAGCC ACGGGCCTGG TTTCGTGACA 
    GGTACTCGAC CGTGTATCGC CCATTCACGA AGAAGGGTGG TGTCATTTTC 
    GCACGTGATG AATATGGAGA CAGCGTCTGG TGGAAGATCT GTGGTGCAGC 
    ATTAGGGAAG ACCATGGACT GGGAGATTAG AGGCTGGATT TGGCTGACCT 
    ACTGGCCTAA CAAACAGAAG ACCTTTCACA GTGAAACAAG GAGGCTTGAA 
    TTCAGAGAAT GTCTGCAACT TCCCCTTATG AAATCTCCAT GATGTATCTT 
    TTGGTACTTT GAATGACCAT AGAGCGCTAT AATGCGATAG TAGTATGTTT 
    AAGTATTTAA AATTCCATAT GCATGCAAAT TTGTACTATC ATAGTTTGTC 
    ATACTTTTAT GCATGCAGAA ATAAACTTCC TAATATACCT GTTTG

    Gene models with high sequence identity

    1. AT2G40390.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); ...
      E-value: 3e-133; Score: 240.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G40390.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 75 Blast hits to 75 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR