K21237

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21237

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21237

Determination of introduced cDNA(s)

  • J013051G09 - Rice Full-length cDNAs - Original: J013051G09

    full reading [+] show sequence

    Nucleotide sequence: J013051G09 - full reading 
    AAGATATCAA AGTCCGATGC GGCAATGCCC CCCTCCATTA ATCTGCGAAA 
    AAAACCTGAA AAGTACAAAG CAAACCACCC TCCGAATCCT ACCTTCTCCT 
    TCCTGGAGAG GAAGGAAGAG AGATAATCGG AGCATATGAT GAGGAGATGG 
    TGGTAGCAGG AGCAGTGGTT GGCGGCTTGG CGCGGCCACA GAGGCATCCC 
    ATTCCCACGC GGCCTCGCCC AAGAATCCTC CTCTCCGGCC TCGACGCATG 
    CTCCTGTTTT TGGAAGGAAA CGAAGTGAAG AAAAAGATCA GAAAAGGCAA 
    CTAGAATTCC AACAGCCTGT TCATTGTTCT GTGAAAAAGG GGCAGTTCTT 
    TTGCAGTGTG TATCCATTTA TTCGCTGTTT CTTTTGGTGG TTTTTTTGGA 
    GGCGGAAAAA AAATTCTGTT CGGGTGCCTG TTCCTGCGTG TTTCGAGGGT 
    TTGCTCAGAG GAAGCAGAGG ATCGAAGGGG GAAAGATTGT CTCTCTTTCT 
    TTTTTTTTTC GCATTTGGGT TCTGAGATTG TTCCGCAACA GGGACCTTTC 
    TTGCCTGTGA GATTCTGAAT CGCCCGAGGC TGGAAAGATT GAAACTTCAC 
    GGCGAGGTCT GCATGTTTGG CTGAAGACGG AGGGGGATAA AGGAAGCAGA 
    GGGTCGGTCT GATGATGCAG TTCCGCAATC TTCTTTCCTT TTGCGTGTTC 
    AGGTCTTGAT GAGATATATT CCTTCCTGTC AAGTTTCTCA ATTTTGACGT 
    GAATTCCGAG TCCGGGGCAT CTTGAGGAAA CCGAGGAAGC ACGGCAGATA 
    CAAGGGTTTC TGTTGGGGCT ATCGGATCAT TTCTCATCTG TTTCTGCTTA 
    TCTTCTCTTG GTTTCGCGAT TGCTCGAGAT TCAAAGATTG GGTTTTGATT 
    GTCTGGAGAT TGAAGAAGCT AGTACCATTG TTGGGTACTT GGGTTCACGG 
    CTCAAGGGTC AAAGAAAAGG GGCAGACATG GCTGTTCAGA TGATTTAGCA 
    GGTCATTGTG TAGGAACAGT TGTCAGGCGC CACCTTGCTT TTTCCTGTAT 
    TCATCTGGTC TGGGTTCTTC GAACTAAGGT TGTAAACTTG CCTGGTGATT 
    AAACGAATCT GTCTGACAAT GTTCTCCTCT ATCATGGCAA AGAAGAGTTA 
    CAAACAGCGG TGCAAATCTG AGAAGGTCCA TATGGGCTGT ATGTCGGGCC 
    TCATCCACAT GTTTGACTTC CGTCGCAGTC CAAAACTTAT TTCAGATGGG 
    ACGATTAGGA GGAGTTCAGT CAGAAGTGAC CTGAAAGGTT CTGAAGATTT 
    CCATGGAATC ATCTTTTCTG ATGAGGACAA AGACTATGGG GTTAAAACAA 
    TTCATGCCAG CAGGCCAAGT ATTAAAGCAC TGATGGAAGA AGAGATGGCC 
    AGTGGAACGC AGATCTTGAA GGAAACACAA AGGAACATAT TTGGGATACG 
    TTCTGATGAT TTGAAGTCTG TGAACCTGCA GGAAGGATCT GATGTTGACC 
    TAGACTTGGC TACAAGTCTC ATGGAATTAT ACAGAAATCA TAATGGCAGT 
    CGCGATATTA TCACTTCGGA AGTATCAGAT CACTCTTCCA GTTTGATTGA 
    CAAAGAGCAC AATACTGATG CTAGTACTCA TCCTAAACAA ATCTCCTGTA 
    GTATAGAGAA AGCACTTGAA GCTGTGGCTG AAGCAGTAAT AACCCATCAA 
    TCTGCAAACG GGAAATACAC AAGCAGCAGC TACGAAGCTA GGCCCAATGA 
    ATTTCTTGAT GCATTACAAT TGCTGAGCGC AAACGAAGAG TTCTTTCTGA 
    TGCTTCTGAA AGACCCAAGC TCTAGGATGT TGCAATGCCT GCAGAACCTG 
    TACACGGCAC TAGGAAATCC CATGTTAGAA CTGGCAGAAG ATGACAAACA 
    AACAAAGTCG AAAGTTACCA TTAACAGTCT AGAGCAGTCT GAGGTTTCGA 
    AATACAGCGT GCAAAAAACA CATAATTTTT TCTTGAAGGA GGATAAGCTA 
    GTCATGAGGA GACCACCAAA ACTGAATGAT AGTCCTCGTG GCGTTAGCAG 
    AATAGTAATA TTGAAGCCAA GTCCTGGAAG AAGTCAGACT AGTCTGATTT 
    CAAGTAGTGC AATGTCGTCA CCAGTACAAA CTCGTGCTGA TTTGCAAGGT 
    CAGGAACAAA GTGACAAATA TGCTCGCCAT TTCTCACTTA GAGAGCTTAA 
    AAGGAGGCTA AGGCTTGCCA TTAGTAACAA TCGAAAGGAT GTCATGAGTA 
    GTACTTTCCA GAAAGATGAT TCAACACAAC AGTTCATTCT CGAGAGTATG 
    TCGACAAGTA TGGACTCTTC TGAATGTGAA AAGGCTGAGA AACCCTCAAT 
    AGTTGACAAG AAAACAATCC CTGAAGATAG TGGAAGTGGC ATGGGGAATG 
    ATGCCACTCA TTGTGCTAGC TCTTTCTTCT ACGAAAAAGC TAAGAAGCAT 
    CTAATCGAGA GGCTAGACAA TCAAAAGAAT GACACTTCTC AGATCGTACA 
    CAAATCAGAA CCCTTTGGGA AATTACTTTC ATATTCGGAG AATGATACGT 
    TTTCTCAAAC TGATTGTCCT CAAGAGGATG TTAAACTGTC AGAGGATTCG 
    ACTGCTTCAT CAGCATTACT GACGACTGAA CAAGAGGATA TTTCATCAAA 
    TTCTGACCCA CCAATGAAGT TTGGGGAGCT AATACCATTG GACACCAGCA 
    CATCGGCTAA CACACAGCTG GATGAATTTA AGACAGACCA TGCCAGTCAT 
    CCAGTCAAAG AGGGCACTAT CTCGCAGGAG TTAACTAGTG AAGGGATTGA 
    CAGCATGAAT GATGCAACAG ATACCCCCCA AGTCTCTATT CAGATCGAAA 
    CTTCAACTGA AAGCTTGGAA CAAATAAATA CCGACCAATG CTTCGCAGAA 
    GAGTCACAAA CCATGAATGC ATTACCAGAA GTATCCCTGC ACACTCCAGA 
    AAAAGTTAAC GAGCAATTCA ATCATAGTCC ATCGGCAGTT GTTGGATTAA 
    CCAAGCCATC CATCTTGACA TTTTCTTGCT CCCCGGAGAA TGCAGATGAC 
    AAAGAGGAGA GACTGAGCCC TCAATCTGTT CTAGATTCTT TCCTGGGAGA 
    TGGTATCAGC CCCAGCCACA AAACTCGAAC GCAAGATGAA TTGTCCATGC 
    CAAGCACAAG GATTCTGTTT AAAGAGGATG ACACTCCCTC GGGAACCCCA 
    ACTTTGCAAA ACACACCACA AGAAGCTATT TTGGATGATA AACAGGCAAG 
    GCTTTCCTTC ATAAAGGTTG TGCTTGAGGC TTCAGACTTC TTGTCTGAGG 
    AAAGTTCAGA GATATGGTAT GTGGACGGAT CACTGCTTGA CACATCTGTA 
    TTGGCTGAAG TAGGAACTTT GTACTGCCTG ACAGACGATG CGGTGTTTCT 
    CTTTGATTGT GTGGAAGAAG CTCTTTGCAA GATCAGGGAT AACTTTTTTG 
    GTTGTGACCC TTGGGTAGCT TATCTGAAAC ACAGTGTGAG GCCAGCTCCG 
    GTAGGAACAG GGCTCATTCA AGAGGTGGAT AATTGCATCG ATTCTCTTGT 
    CAGTGATGAG GTTCCAAGTA CATTAGATCG GGTGGTGCTG AAAGACCTGG 
    AGAGTGGATC ATGGATGGAC CTTCGGGTTG ATACTGAAGA AGTTGCTATA 
    GAGGTGTGGG ATACTTTGCT TGATGATTTA CTGGAGGAAA TGGTGTTTGA 
    CTTGTGGCTT TAAGATTGTT TTGTTGCCAT CCGATGGAAA CTGATAGAGT 
    TTATAGTTCG GCACTTCGGC AGGATTTTAT TCACCAAAAA CCATAGTACA 
    AAAAGCTTTG AAAAAGTGAG TGTGACAGAT TTAAACAGAG TGTATACAGC 
    GCAGTAGAGT TAGGCTTGCC TGACTGTTTG CATCATACTA TAAATCTTGA 
    CTATATGTGG CTCCTAACAC TAGGAATTTT TCTTCTTATT AATGCTTCTT 
    CTATCATTTC TGTTCTCTGT ACAGGTGTGA AAGTAGGAAG AATAAGTTCA 
    GTTGTATATG TACTGCCTAA TTATAGTTTT TTTTTTCCTC ATGAAAGTAA 
    AACAATTTCC CTTGTTTATC

    Gene models with high sequence identity

    1. AT4G00440.3 [+] show detail - Protein of unknown function (DUF3741)
      E-value: 2e-39; Score: 162.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF3741 4.1e-11
    HMMPanther PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRAN 1.3e-14

    See the detailed result >

    AT4G00440.3

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3741)
    Computational Description
    FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR