K21241

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21241

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21241

Determination of introduced cDNA(s)

  • J033046F02 - Rice Full-length cDNAs - Original: J033046F02

    full reading [+] show sequence

    Nucleotide sequence: J033046F02 - full reading
    GGTCCCGCTC CTCTCCGTCC TTTTCTGGAC GGACTCGCCT CGGCGGCCGC 
    AGCCAGCCAC AGCCGCCGCT TACTTGAGAT TGAGATTGTT GCCATCCCGT
    TGCCGATGGC GGCGATGCTC GCGCCGGCCG CGCTCCCGCC CCGAGGTTTA
    CAGAGTAAGG CGGTTGGAAA TGCGGAGTCG CAGTTGTTGC TACATGGAAA
    AGGTTGCATA GTGGCCGACG CAATGCTGTC AGAATATTTG CAGCAAAGAG
    TAATGAAAGG AGGAGGAAAT CACAAAGTAT ATCTCAAGGT CCAACATTTA
    TAAGTGAAGA AGCTTCTTCT TCAGGCAGTG GCGAAAACCC CACCACCAGC
    CTTGAGGTCA ATGCCAATGA TGTTACTACT GACGAGAAAT TCACAGTTGC
    CCCAAGGAAT GCGGTTCTTC AGGCTTGTAC TCTCACATCT AGCTTACTCC
    TTGCAGGAGG TCTCGTTCTT CGTGAGGCAT CACATTTTGC ATCTTTGAAT
    GGATGGCCGG TTGCTGACCC TATGAATTTG TCATGTATGC TTTCTTCTTA
    TCTTTACAAA TAAATGATGT GCCATGTAAT AATGTTGAGT TACCTAAATG
    TATGTAAGTC GATTTCTGTA TTGTTTTTCT GCAGTCAATT TTGAGACCTG
    GCATCTTGAG TTGATTGCAG GACTTGTAAT AATAATATCA TCTAGCAGAT
    ATATTCTTCT ACAGACATGG CCAGATTTCA GATATTCCAG TGAGACTGCA
    AATAGACAAG TATATACAAC TTTACAATCA GTATTTCCTT TTTGTTTTAT
    TTTCCTTCTC ATGAAGGTCT GTCATTGGCA AATACAGTTT CTCAAGTAGC
    TGATGAATCT ATGCTGTTGT CTGAATGAAC ATAATAACTT TTAGAGTACA
    TTGTAACAAT TGCATTACCT CACCAGTAAA TGATGTACAT TTTCACCTAG
    TCAATAAATG CTCTGCTCTT TTTATGAACT GAGTGGAACC AAGGTTCCAA
    AAACTGGAGT AGATCAGTAA CTGGTCCAGA GCCAGGGACT TGTTAGAGGT
    TGTCTATTGG CTAGAAGCCT ATAGATTCAA AACTTATATT TAAATAATTC
    CAACTGGTTG CTGGTCAAAA TTTTGAACTT TTGGATTTGA ACCCTTTTCC
    TGTAACTGGC CAGTTACTGG ATTTAACCAG TGGCTGGTAA TCTAGACAGA
    CCAGTATTTA GAATGCTGAG TGCAACGAAA GATTTTACCA AGTCTGGCAC
    ATAATCGCAA AGTTCCCGGG TCGATGGGAT CGAGGAATGG GTCGAGGAAT
    GTGGTATGCT ACTTGCGAGA GGTTTTTACA AGGTGGGGAC AAAAATGACC
    CCGCGTTCCC GGGACAGGGA TGGCTGGCGT TCCCGGGTTG AGGAACGTTG
    CCACCAACCC CGTTTCCAAA TATACAAAGT TGAGTTGCAT AGTTGCATTA
    GTTTCCCCTA ATGCAAGTGT TTCCGTTATA TTGTAATATG TCATAGATCT
    TTATTTCAAG ATGCAAAAAA GTACATTGTA TCCAGTACTA TCAGGTGTCT
    TTTCTTTATA ATCATTTGAG ACTTCGGCCC TGGAACACTT CAAATTCTTA
    GATAGTGCAA GTTCCTTCAC TACACTTCAA CTCTTAATGG TTTCAATTTT
    TGTCAACTAG ATCCTTACTT CACTGGAGAC TTTCGATTAT ATCGTAGTTG
    CTTGTCTTCC TGGGATAAGC GAGGAGGTGC TGTTTCGAGG GGCATTGATG
    CCTATCTTTG GACTGAACTG GATAAGTGCC TTTGTAACTA GTGCCATTTT
    CGGTATTCTT CACTTGGGCA ATGGCAGAAA ATATTCATTT GCAATCTGGG
    CAACGTTTGT TGGCGTAGCA TATGGTTTAG CTACCATAGC TTCTTCAAGC
    ATCATAGTTC CAATGGCTTC TCACTCCATA AACAATATTA TCGGAGGCCT
    AATTTGGCGC TTTACCAACA ATACAGAAAG AGAATAGGTT TCTCCTTAGT
    ATATTTGGAA ATATATATTT TCAGTTTTAG GTGTTATTTG TTTTTTTGCT
    TTAGCATAGA CCTTTTAGTT TGTCTATACT GGTTGTTTTT GTAACTTGTA
    CTGCTAGGAT GCTTGAAGAA ATGTTTTGCC TTACTGTTCT TTAAGATCAT
    TTGGGCACGA TGTGTATTAC AGATAACTAT TT

    Gene models with high sequence identity

    1. AT3G26085.3 [+] show detail - CAAX amino terminal protease family protein
      E-value: 2e-37; Score: 154.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G26085.3

    Model type
    Protein coding
    Short Description
    CAAX amino terminal protease family protein
    Computational Description
    CAAX amino terminal protease family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675).
    Link
    InterPro Scan - TAIR