K21324

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21324

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21324

Determination of introduced cDNA(s)

  • J023114L14 - Rice Full-length cDNAs - Original: J023114L14

    full reading [+] show sequence

    Nucleotide sequence: J023114L14 - full reading
    GCTTCTTCTT CTTCGCGAAA ACGAAAGAAA AGGAGAGGCA AGAACAAGAA 
    CATCTCATCC CCAATTCCCC TCTCCCTAAA CCCTAATCCC GTCCGATTCG
    CCCCCACCGG CCTCCAAGAT CGAAGCTCTT TCGGCATCTC CGGCTGGTCG
    GAGAGGAGCT GCGCGTGGAG GGGGGGACTC TCGATTCCGG TGAGAAAACG
    GCGCGACCCT TCTCCCGATT TCGCGATTTC GGTACCGTAC GGTTGCTCGT
    CGGCGTCGGA TCCGGACGCG TGTGGGCGGC GAAAGGTTGG CCCTCGCGGT
    TGATTTGGTG GTGGCGCGGT GTCTGAGATG GTTGCGTGAG CCATTCGGAG
    AGGACAAGGT CGAGGAGGAG CAGCAGCTTC TGTTCGTGGC ATTTCTGTTG
    CAAAGATTAG TGCTCCATTT CTCTGCAACC TCGCGCGGGG GGGAGGGGGG
    GAGGGCGTTT GATCCATTTC TCCATTTCGG GTGGTTTCCA ATGGCTCGAA
    TCCATGCCGA CCCGGTGCTG GAGGCCGACC AATTCGACCG GCTGCCGGAC
    TCGCTTGTGC TGGTGATCCT CAACAATGTC GAGGATGTGC GCTCGCTCGG
    CCGGTGCTCC GCCGTGTCGA AGCGGTTCTA CGGGCTCGTG CCCCTCGTCC
    ATGATGTCTA TGTCAAGATC GACCGCGTCG TGACGGTCGA CGGCGAAGCT
    GAGGACGCGC TTAACCTGTC CTCGCCGAAG CCGAGGAACA TCCTCTCGCA
    TTTCCTCAAG ATGATGCTGT TCACGATCAT CAAGCCGTTC CACAGCATGC
    GCGGCCCGAA CGGTGCTGGG CGGCCGCTGT TCCCGCAGCT CGCGCAGCAC
    TCGCCGGCGC AGGTGCTCCG GAACTTCACG CACATCCGGA ATCTGCGGGT
    GGAGCTGCCC TCGGGGGATG TGGGGACTGA GGAGGGAGTT CTCCTGAAAT
    GGCGAGCGGA GTATGGGAGT ACGCTTCAGA ATTGTGTGAT TCTTGGGGGT
    ACTCAGGTCG ACCGCAAGCC TGTTGGTGCA GAGCATGAGC TGTATTCGGA
    GGACAATGGA AGCATGCCGG AATCCTTCTA TACCAATGGA GGGTTGAAAC
    TCCGCGTCGT GTGGACAATC AGCTCTCTGA TTGCGGCATC AACGAGACAT
    TATCTTCTTC GGTCAATTAT CAAGGATCAT CCCACTCTTA CAAGCTTGGT
    ACTGACCGAT GCTGATGGCC AGGGCACATT GTCCATGGGA GCGGAGCAGC
    TTAAGGAATT TAGGGAGAAC CAGTTGTCGG CCTCAGCATG TTCTAACAGG
    ACTCAGGTTC CAGCATGCAA CATGAAGCTC AAATACGCTC CATATCTTGA
    GCTTCCTGGC GGCATTGCGT TGCAAGGTGC AACGTTGGTC GCTATCAAGC
    CCTCACCCGA GGGAAGCAAT GGCGGTCATA CTAGCCGCAA GGAAACGGAT
    GCATTTGTCT CCGGAGCATT TGATGGACCA TTCAAGTTTG CTGTGAAGGC
    GCTGATGAAG AGGCGAACTT ACCTTCTGGA GATGAATGGC TTCTAGATAT
    CTTGTGCTGT TACTGGGTAC CTAGCTTGTT GGTCCAGGCA GTCATCTAGT
    TACTTTTAAC TTCTGGTCTA TGTAATAGGT TGTGCTTTGC TCTCTGTTGT
    ATTAGCTCTC TGTACAGTGG TGACATTCTG TTGGTTATAT GGAAATCATA
    TCAAGTTAGT GTATCTTTCT CATTGCTCTC CCAATGCCAT GTCATGATTT
    TATGCAACTA ACATCATGCA AGCTGATTGT TTGCTCTTTT TGTC

    Gene models with high sequence identity

    1. AT4G18380.2 [+] show detail - F-box family protein
      E-value: 3e-92; Score: 336.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G18380.2

    Model type
    Protein coding
    Short Description
    F-box family protein
    Computational Description
    F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G46170.1).
    Link
    InterPro Scan - TAIR