K21502

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21502

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21502

Determination of introduced cDNA(s)

  • J013071H06 - Rice Full-length cDNAs - Original: J013071H06

    full reading [+] show sequence

    Nucleotide sequence: J013071H06 - full reading 
    GACAGCCGCA AGCACAGTGA GGCTGAGGCA AGCGGAGCGC GGCGGAGCTA 
    GGGTTTGCCT CGCCCCGATC CGGCGGTGCG CGGCGGCGGA GTCCGCCGAG 
    GTCGGCGGCC GCGTCGGAGC CCCCCCGCGG CGCGGTTGGT GGGGTGGGGG 
    GGGGAGCGGA TTTGGGTGCT GGGGGTTGGG GCCGGGCGCG GCCCGGGGAG 
    GGGGCTCAGA TCTGGGGATG GCCGACGGGG TGGAGGAGGG GAATGCGGTG 
    GCGCCCAGGG GCCCCGCGCG GCGGAGGGGC ACCGTGCGGG CCAGCCTCGA 
    CGCCGACGAG TTCATCGCGC TGATGCACGG CTCGGATCCC GTCAGGGTGG 
    AGCTCACCCG CCTCGAGAAC GAGCTGAGGG ACAAGGAGAG GGAGCTCGGG 
    GAGGCGCAGA CGGAGATACG CGCGCTACGG CTGTCGGAGA GGGCGCGGGA 
    GAAGGCCGTG GAGGAGCTTA CAGATGAGTT GGAGAAGATG TTTGAGAAAC 
    TCAAGTTGAC AGAATCACTC CTTGACAGCA AAAATCTAGA AGTCAAGAAG 
    ATTAATGATG AGAAAAAGGC TGCAATGGCT GCTCAGTTTG CAGCAGAAGC 
    GACTTTGCGG AGAGTACATG CAGCCCAAAA GGATGATGAC ATGCCACCAA 
    TTGAAGCCAT TCTCGCACCG CTTGAAGCTG AGCTAAAGCT TGCTCGGCAA 
    GAGATTGCAA AACTACAAGA TGACAATCGA GCTCTGGATC GTCTAACAAA 
    ACAAAAGGAG GCAGCACTAC TAGATGCAGA AAGGACTGTG GAAATAGCAA 
    TGGCAAAAGC TGCTATGGTT GATGACTTAC AAAACAAGAA CCAAGAGTTG 
    ATGAAGCAAA TAGAGATCTG TCATGAAGAA AATAAAATAT TGGACAAGTT 
    ACAACGCCAA AAGGTTGCAG AAGTTAAAAA ACTTAGCCTA ACCGTGAAAG 
    AACTGGAAGA GGCTGTTCTT CGAGGTGGCG CAACTGCTAA TGTAGTTAGA 
    GATTACCAGC GCCAAGTTCA GGAAGTGAAT GACCAAAAAA AGACACTTGA 
    ATGTGAACTT GCTCGTGCAA AAGTTACAGC AAACAGGGTT GCTGTTGTGG 
    TTGCCAACGA GTGGAAAGAT TCTAATGACA AAGTCATGCC AGTTAAACAG 
    TGGCTTGAAG AGCGCAGATT CCTGCAGGGT GAAATGCAAC AACTTCGTGA 
    TAAGCTTGCT GTCGCAGAGC GGACAGCAAG ATCTGAGGCC CAATTAAAGG 
    AAAAATATCA GTTACGCCTG AAGGTTTTAG AAGATGGACT GAGAGGGCCA 
    CCAAGTGGCT CTAGTCGTCT GCCTACCGAG GGAAAGAGCT TCAGCAATGG 
    CCCTTCTCGT CGGTTATCAC TCGGCGGAGC TGATAATATG TCTAAATTGT 
    CTCCAAATGG TTTATTAGCA AGGAGATCTC CATCTTTTCA TTCAAGATCC 
    TCTCTTTCTT CTAGCAGCAG CTTGGTCCTA AAGCATGCTA AAGGCACTTC 
    AAAGTCGTTT GATGGTGGTA CGAGGTCATT AGACAGGAGC AAGATTAATG 
    GGAATGGAGC TCATTTACTT AACCGTTCTA CTGATGCTGT CAGAGATTGT 
    GAAACTAATG ATAGTTGGAA AGGAAATGCA GATGAGGGAA CCATTGAAAA 
    TACAAATAGC AACACTGACG AGAGTAATAA AGAAACTGCA AATAACAAGT 
    CAGCTGAGAT GGTATCTGGT TTTCTTTATG ATATGTTGCA GAAGGAGGTA 
    ATTTCTTTGA GAAAGGCATG CCATGAAAAA GATCAGAGTC TAAAAGATAA 
    AGATGATGCG ATTGAGATGC TTGCTAAGAA AGTAGATACC TTAACTAAAG 
    CTATGGAAGT AGAGGCGAAA AAAATGAGGC GGGAGGTTGC TGCCATGGAG 
    AAAGAAGTTG CAGCTATGCG TGTTGATAAG GAACAAGAAG TCAAAGCCAG 
    GCGGCTTGGT AGTTCTAAAG GGACTGGAAG TTCTCAAGTG CTTTCTGGAA 
    GCCGGAGCTC ATCACGAAGT GGGCTTACTC GCAACTACCA ATGACAGCGG 
    CACTAACACC AGGCGGCATT CATCGATACG TTCCATTTCC ATTTCACCCT 
    GTATTTGTTC CATTCACTTC CCTATTGATT TTGTGACCAA GATCCTAGCA 
    CCTGCGATGT GATACCTAGA TTGGGGAAAA GAGTAGGCTC GGGTCTGATC 
    TGACGTGATT GCTATTGCAC CGTGGAGGAA TCGGTCTTTT GCAGAGGCGA 
    GGCCCTAATC CCAGTGTGGT CTGGTGCCCC CTCTCTTTGT CAAGCAGTGC 
    AGCGCATCTG GTGATGTATA GGCTGGGCGA TCTCTGCGCC TTCTCCCATC 
    TGTTAAAATT TATGTAGCTT AGCGTGTTTG TTTGGTTCTG CTTCTGCACG 
    CCCATCATCG CCCAGGTTGT GAATATCGTT GTTCTCACAT GATTATTATT 
    GCCTTTTCCG TTCTGTTATG TTCGGTTTGC TCTGATTCGG GTTGGATGAT 
    TGTTTCATCC CATTTGCTTT GCTGTGTGCC TGTGTTCATT GTTGTTCGTT 
    GACAGCTACC GCCTACCGGC CTATGCGAAT GTGGTTTATC GACAGAGCAA 
    CTGATTGATT TTCTCTCATT GATTATTTTT ATTTTTAAGT GGATGGAGTA 
    GCATAATATT AGTAAACGTG ATGGTCGCTG GCAGAAATGA AGTCAAAATA 
    GGAATTCGAT AATAAAAAAA AAGAAGGGGC AATTTTGTTT TTACCCTTAC 
    TTTGATGTCC

    Gene models with high sequence identity

    1. AT1G24764.1 [+] show detail - microtubule-associated proteins 70-2
      E-value: 0; Score: 666.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Myosin II heavy chain-like 1.5e-164
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G24764.1

    Model type
    Protein coding
    Short Description
    microtubule-associated proteins 70-2
    Curator Summary
    Member of the MAP70 protein family.
    Computational Description
    microtubule-associated proteins 70-2 (MAP70-2); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-1 (TAIR:AT1G68060.1); Has 48419 Blast hits to 29383 proteins in 2175 species: Archae - 681; Bacteria - 6937; Metazoa - 23825; Fungi - 4071; Plants - 3202; Viruses - 118; Other Eukaryotes - 9585 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR