K21516

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21516

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21516

Determination of introduced cDNA(s)

  • J023014K19 - Rice Full-length cDNAs - Original: J023014K19

    full reading [+] show sequence

    Nucleotide sequence: J023014K19 - full reading 
    GAATCAATTC CTCTCCCGCG ACACGCGCGC GAGCTCAACT GCCTCGCTTC 
    CTCCCTCCTC CCGATCGACC GCGCCATGGC TGCCGCCGCT GTCACCAAGT 
    CGCCGCCGGT GCTGGTGCCC CCGGCGGGGC CCACCCCGGG CGGCTCCCTC 
    CCGCTCTCCT CCATCGACAA GACCGCCGCC GTCCGCGTCT CCGTCGACTT 
    CATCCAGGTC TTCCCCTCCT CCGCCGAAGC CGCCAAGGAC CAGGCCGCAT 
    CGGTCGCCGC CATGCGGGAG GGTTTCGCCA GGGCGCTCGT CCACTACTAC 
    CCCGTCGCCG GCCGCATCGC GGAGCCGGTC CCCGGGGAGC CCGAGATCGA 
    CTGCACCGGG GAAGGGGTGT GGTTCATCGA GGCCGAGGCG AGCTGCTCGC 
    TCGAGGAGGC GCGCAACCTC GAGCGCCCCC TGTGCATCCC CAAGGAGGAG 
    CTGCTCCCTC GCCCGCCGCC CGAGGTCCGC GTCGAGGACA CCGTGCTCCT 
    CGCGCAGATT ACGAAGTTCA CATGCGGTGG ATTTGCTGTG GGCATTTGCT 
    TCAGTAACTT GGTGTTTGAC GGGCAAGGTG CAGCCCAGTT CCTGAAAGCA 
    GTTGGTGAGA TGGCAAGAGG GCTCCCTGAG CCATCACTCA AACCAATTTG 
    GGCCAGGGAT GCCATTCCCA ACCCTCCCAA GCCACCTCTA GGACCACCTC 
    CATCGTTTAC TGCATTCAAC TTTGAGAAAT CCGTCATTGA GATCTCGTTG 
    GATAGCATCA AGCGTGTCAA GGACCAGGTC GCAAGTGAGA CCAACCAGAA 
    ATGCTCCACC TTCGATGTGG TCACTGCCAT GATGTTCAAA TCCCGTACTT 
    TGGCTATTGA CTTTGCACCT GATGCCGATG TTCGTCTGGG TTTTGCTGCT 
    AGCACACGTC ACCTGCTGAA CAATGTGCTG CCTTCAGTCG ACGGCTACTA 
    CGGTAACTGT GTCTACCCTG GTGGCCTCGC CAAAACCAGC CAGGAGGTCA 
    AGGATGCGTC GCTCGTAGAG ATTGTGACAG CGATCAGGGA AGCCAAGGAT 
    GTGCTCTCGA CACGGTTCCT CGATTGGATG AGCGGTGGTG CCAAGGAGAA 
    CCATTACAAT GTGTCGCTGG ATTACGGCAC ACTAGTCGTC ACAGATTGGA 
    GCCATGTCGG GTTCAACGAG GTGGACTACG GGTTTGGCGA GCCGAGCTAT 
    GTGTTCACCC TGAATGATGA TGTGAACATT GTGCCGTCCG TCGTCTACCT 
    GAAGCCGCCC AAGCCGAAGC AGGGAATCAG GTTGGTGCTG CAGTGCGTGG 
    AGGCTCAGCA CTCCAAGGTT TTCGGTGAGG AGTTGCAGAA GCTTGCATAG 
    AGGTAACTTC GTGTTTATAC GCCTACACTT CGCAGCGTTG AGAGCTGTTG 
    TATTCTGGTG TGTTGAATAG CCGCTTCTTG AACTTGGTTA CAAATAAAAC 
    AAGGTGGATC GTGTTTGTAT TCTGTATTGT TGTTACCATA CTACATTATA 
    CATTGATTGA CATTGTTGAG GCAGTACTGT TACAGTTGAG AACAAATGAT 
    TCCATTGATT TC

    Gene models with high sequence identity

    1. AT3G62160.1 [+] show detail - HXXXD-type acyl-transferase family protein
      E-value: 8e-63; Score: 238.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 4.4e-51
    Gene3D no description 8.8e-30
    HMMPfam Transferase 1.7e-66

    See the detailed result >

    AT3G62160.1

    Model type
    Protein coding
    Short Description
    HXXXD-type acyl-transferase family protein
    Computational Description
    HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G28680.1); Has 2278 Blast hits to 2266 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 2263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR