K21633

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21633

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21633

Determination of introduced cDNA(s)

  • J023145K15 - Rice Full-length cDNAs - Original: J023145K15

    full reading [+] show sequence

    Nucleotide sequence: J023145K15 - full reading 
    GAGCACATCA ACGATCGAAC GAACAACGCA CTCTGCAGCT AGCTATACAA 
    TCTCTGTTTA ATTAGCTAGG TAGCTAGCGA GTCATAAATC AAGAAGCCAT 
    GGACTTTTAC GGGCGGCGCG AGCAGTACGG CGGGTATGGC GGGTACGGTG 
    GCGGCGGCGC CCTGGCGACG CCGGGGTACG CGCCGGCGGC GCCGTACGGG 
    ATGTCGCAGG TGAGCATCGA GGGGAACGGG TGTGGCAGGA CGCTGCCGCC 
    GCAGCCGACG GTGAAGGTGT ACTGCCGGGC GAACCCGAAC TACGCGATGA 
    CGGCGCGGAA CGGCGCGGTG GTGCTGGCGC CGGCGAACCC CAAGGACGAG 
    TACCAGCATT GGATCAAGGA CATGAGGTGG AGCACCAGCA TCAAGGACGA 
    GGAGGGCTAC CCTGCCTTCG CCCTCGTCAA CAAGGCCACC GGCCAGGCCA 
    TCAAGCACTC CCTCGGCCAG TCACACCCTG TGAGGCTGGT GCCGTACAAC 
    CCGGAGGTGA TGGACGAGTC GGTGCTGTGG ACGGAGAGCC GCGACGTGGG 
    GAACGGGTTC AGGTGCATCC GCATGGTGAA CAACATCTAC CTCAACTTCG 
    ACGCCTTCCA CGGCGACAAG TACCACGGCG GCGTCCGCGA CGGCACCGAC 
    ATCGTGCTCT GGAAGTGGTG CGAGGGCGAC AACCAGCGCT GGAAGATCCA 
    GCCCTACTAC TGAGCTGATC GATACATCGA TCCAGCTCTC TATCAAGGCT 
    CAAGTTGATA TCAACGAATC TGGTGCAGAA TAATTATTCT CTGCTAGCTA 
    CCCACCTATA TACGTAGCTA AGAGTAACTT ATGCTCGTCC GTACCGTATG 
    ATTATCGTGT GGTGTGCTTG TATCTTGTAC AAGTTAATTA ATTACCTGGC 
    AATAAGAGCT CCTCTCGCTG GGCGACACAT ATATAAACAC ATACAGTTGG 
    GGCTTGATTC AACTTGCATA TATGCTGTGC ATATGCG

    Gene models with high sequence identity

    1. AT2G39050.1 [+] show detail - hydroxyproline-rich glycoprotein family protein
      E-value: 8e-57; Score: 217.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G39050.1

    Model type
    Protein coding
    Short Description
    hydroxyproline-rich glycoprotein family protein
    Computational Description
    hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR