K21710

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21710

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21710

Determination of introduced cDNA(s)

  • J023111N08 - Rice Full-length cDNAs - Original: J023111N08

    full reading [+] show sequence

    Nucleotide sequence: J023111N08 - full reading 
    GACCCCCAAC GCAACGCTCC TCGTCGTCTC CTCTTGCTCC CCACCCCACC 
    CCACCCCACC CGTCCTCCTC GCGGCGAGCC ATGGCGGCGC CGTTCGTCCG 
    CCGCCCGACC GATGACGGCA CCAGCGGCAC CAGTGCGAGC GCTCTCCTGG 
    GGCGGCCTTA GATGGGTACC TCGGACGACT CGAAGGGTGC TTCCTCTCCT 
    CATCTTCGCC GTGTCCATCC CACCCGATCG ATCTGTGTAG GAGAAGATAT 
    TATAAAGAGC CTTGATATGG GGAAAGGAAA GGCCCGAGAT GCAGTCTTAG 
    CTCGTAAAAA GGATGGGATT GGGTTGCTGC ATGCCGCAGC ATGCCAGGGC 
    CATCTGACTG TTTGCAAGTT CTTGATGGAG GAATTGGGGG GGTTGCCATG 
    TCTACGTTTG GTAGTATGAT GTGAAGTATA CCAATGTGCT GTTTATCACA 
    TATGTTTAAC ACCGTTTATG GCCTGTGCTG AGTCTGGTGA TGTTCCTACT 
    GTGAAGTATT TTCTTGATCA TGGTGGTGAT GTAACAAAAT CAGATGATAA 
    AGGATGCACA CAGTTCTCCA CCATGCTGCT GGCACAGATC CCCCTCAATA 
    TCCAGTTCAT TCTTATATAT ATTACCAATT GTATTGTTGT ACAAGGCTCT 
    ATAATACTGC AATACTATTA ATGGAGTATG TTTCAATCAC AGCTTCACCG 
    TAATCATTTC TTATGTCCTT GTATTTATAG CAAACGCCTG CAAATAAACC 
    ATTTCTCTCC TCCTTTATTA ATGAAAAGAG GAGTCCTCCT GCCCTTCGAA 
    AAAAAAGGTA ATCATTTCTT ATGTGGCAAT CTAGATACCT TTAGTTTCTA 
    TATATCACCA CTCAAAGTTA TATAAGTTTG CTCTATTTAT ACTTGATCAC 
    ATGTAATCTG TTCCAAGTTG TTTATTGTAA TGGTCATTGT TTATTCACAT 
    AACCCAATTT CTATAGTATC TCTCTCCCAG GATTTATAGC TCATCTCATT 
    CACGCTCAGG ATGCTGTAAG GTAACAGAGT TCTTGCTTTC AAAAGGAATA 
    CCTATTGACA TAGACGGCGA TTATTATACA TCTTGACCTT TAGTAATACT 
    CCTAAGTCTT AAGATTACCA TTTGGCATGC TCTAAGTAAG GCTTGGGTGA 
    TGATTTCGGC GGAAAGAGTG AAAACTTGGG CGTTCAATTC ATGACACTAA 
    TAAAACCTAT CCTGCTCTAT GAGCTATTCA ACTCTAAATG ATTGAAATGC 
    TTTTGGATTA TCATGTCATT GTTTGTACCT TCAGTAACTT CATTGCCGAC 
    CTTCTCATTT TATATTGACA TCACTAAATG TGCATTAAAA TCTCTTCCAA 
    TGCGGCAACT CCATCTTGGC TTCATGAACT CTGAACTCGT TTTTAAGAAT 
    TGGCAAACGA TGATCAGAAA AAAAAAAGTT AAAGTATTGT ATTTCTTTCC 
    TTTTTCTTTC ACATATTCTG CTTTTAGCCT AACGTAATTG CCAACAATGG 
    AGCCTGTAGT ACCCTGATAA GTGCTCTTGA CTGCTGTTCG TTGAAGTGCA 
    TGAAGCTACT CATAAAGGCT GGTGCTGATG TTAATAACAA GGGTACAGGT 
    ATAACTCCCT TAATGTTTGC CGCGTTGCAA GGGTGTTATA CTTACTTCAT 
    CAAGATTCTC CTGGAGACTG GAGCAATCCC TAATATTCCC AATGTTTTGG 
    GTTGGTTGCC AGTAGAGCAT GTTGCATCAT GTGATTGCAG GGAAGGAGTT 
    GAAATGCTAT TTCCATTCAC ATCCCCAAAT TCCAAATGTC CCAAACTGGA 
    GTGTTGATGG AATAATTTCT CATGCAAAGG TCAACCATAC AAAGCCAACG 
    GATCAACATC AGGAGAGTAG AAAAGCTATT TTGAAGTCGC ATGCAGATTT 
    GGCATTTAGG CAGAAGAATT ACGACTGTGC AGCAAAAGTA TATGATTTGA 
    CTCGTGGACC AACTGCAGTT CTGTACGCAA ACAAGAGCAT TTGTAGATTG 
    CTCATGGGTG ATGGTGAAGG TGCTCTGTCT GATGGAGATG CCGAATGATG 
    CAGCCTAACT GGGCAAAAGC TCACATGCTA CTCAAGGAGT AGAAGCATGC 
    ATGCGATGCT CACTTGGATA CGCAAAAATT GGATCCTGGG AGCGTTGAGA 
    TTGAGAGGGA ACTTAGGTAT CATCTTCTGT TTCTCTTGAG CATGTTTTCC 
    AATCACAAAT GCGGTTGTGC ACGGAACATG ACTGTTATTA TTAAGATGAC 
    GTTGTGGCCA CATTTACTGG AGCTGAACAC TGAAACTTTT CTTTTTGGTT 
    TTATATGCCT TTCTTCCATC TTTGAGTTGA TGATGGCAAC GTGCATTGGC 
    TGCATGCATT TAACTGACAT TTAACTGCAT GGCAATCTGA TTTGGCTGGC 
    ATATGCAAAT CCTGCTCGTT TGTCTTAAAG GAGAAAGGCA GCTCATTATT 
    CAGACATTTC AGTGCCCAAT GAGTTCCGAC ATTGTCATTT TCACCCATTT 
    TTCTCGCATG AAGGAAAATG AGGGAACCGT GGGCGTCATT GTCTGTTATC 
    ATTTTGACTT TGCTTTAATC ATTAAGTTTT CATGACTAGA ACGATTCTAA 
    TGAATGTTGG CATGTTGCTA TGTAAAACAT TGGAAATGAA TGACAGAATT 
    GCTAGTGTTC ATTTTAACAT

    Gene models with high sequence identity

    1. AT3G04710.3 [+] show detail - ankyrin repeat family protein
      E-value: 0.000000000000005; Score: 42.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Ankyrin repeat-containing domain 0.0000000000000760000011115812
    ProfileScan Ankyrin repeat-containing domain 0
    Gene3D Ankyrin repeat-containing domain 0.00000000760000011115812
    HMMSmart Ankyrin repeat 0.140000007335441
    HMMSmart Ankyrin repeat 0.00390000075897037
    ProfileScan Ankyrin repeat 0
    HMMPfam Ankyrin repeat 0.018
    HMMPanther PTHR22904:SF1 0.00000001
    HMMPanther PTHR22904 0.00000001

    See the detailed result >

    AT3G04710.3

    Model type
    Protein coding
    Short Description
    ankyrin repeat family protein
    Computational Description
    ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1).
    Link
    InterPro Scan - TAIR