K21712

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21712

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21712

Determination of introduced cDNA(s)

  • J023091C23 - Rice Full-length cDNAs - Original: J023091C23

    full reading [+] show sequence

    Nucleotide sequence: J023091C23 - full reading 
    GTTATTATCA ATCTATTTGC TGGAGTATCA CACTACCAGG CTTCTTCTTG 
    TCTTTTTCTT TTTACAAATT TACTCTGTGT CTTTGTTCAA CCTGAAGAAA 
    AATAAGTAAT TCCTGTCACT TTTGTAGGTG GGCCGTTTGC TCTTTATTCA 
    CTGCTTTGCA GGCATGCGAA ACTTAGTTTT CTTCCAAATC AACAATCAGC 
    AGATGAAGAG CTATCGACAT ACTACAGAAA TGGTTTTACT TCACGTCATG 
    GATCTTTACC TTGGCTAAGA AGGTTCATGG AGAAGCACAA GAATGCCAGA 
    ACCGTGCTTC TCCTCATAGT TCTGTGCGGT GCTAGCATGA TGATTGGTGA 
    TGGTATCCTT ACTCCAGCAA TCTCAGTTCT GTCATCTATG TCTGGATTGA 
    AAGTTCGAGC TACTGGTTTA CATGATCGTT CTGTTGTACT CCTTTCATGC 
    ATTGTGTTGG TTGGTCTATT TGCATTGCAA CACCGAGGTA CTCAGAAGGT 
    AGCGTTCATG TTTGCACCAA TTGTCGTCAT CTGGCTCTTT TGCATTGGTG 
    GAATTGGTTT ATACAACATA ATACATTGGA ACCCAAGGAT ATACCAAGCT 
    CTCTCTCCAT ATTATATTGT TAAGTTCTTT AGGACGACAG GTAAAGATGG 
    TTGGATTGCT CTAGGAGGCA TACTTCTTTC TATGACAGGC TGTGAAGCTA 
    TGTTTGCCGA CCTTGGTCAC TTCACGAGTG CATCTGTCAG GCTAGCTTTT 
    ATCACCATCA TATACCCATG TCTTATATTA CAATATATGG GTCAGGCGGC 
    ATTTCTGTCA AAAAATATCC TTGACATGCC CACAGGTTTT TATGATTCTA 
    TCCCAGGACC TATATTTTGG CCTGTGTTTG TGGTGGCCAC TCTCGCTGCT 
    GTTGTTGGTA GCCAAGCTGT CATTTCAGCA ACATTCTCTA TTGTGAAGCA 
    GTGCCATTCG TTGGGATGTT TCCCTCGAGT GAAGGTTGTC CACACATCAA 
    GGTGGATCTA TGGACAGATA TACATTCCTG AAATAAATTG GATCCTTATG 
    GTGCTCTGTG TAGCTGTCAC AGTTGCATTC CGTGATATTA CACTTATTGG 
    TAATGCCTAT GGTGTTGCGT GCATGACTGT TATGTTTGTC ACTACATTCT 
    TGATGGCATT GATCATGATC TTCGTTTGGC AAAAGAACAT AATATTTGCT 
    CTATCTTTCT TTTTATTATT CGGATCCGTT GAAGTTGTTT ATCTCTCCTC 
    ATCCCTCATG AAGGTTACTC AGGGAGGATG GGTGCCGCTT GTGCTTGCTT 
    TAATATTCAT GTCTGTCATG TATATTTGGC ACTATGGGAC AAGGAAGAAG 
    TACCAGTATG ATCTTCAGAA TAAGGTATCA ATGAGATATA TCCTGTCCCT 
    GGGTCCAAGC CTTGACGTAG TTCGTGTCCC AGGAATTGGT CTGATTTACA 
    CAGAACTGGT GACTGGTGTA CCCAACATCT TCACACATTT CACTACTAAT 
    CTCCCTGCCT TTCATGAAGT CCTAGTCTTT CTTTGTGTCA AGTCAGTACC 
    AGTACCATAT GTGTCGCCAG ATGAACGATA CCTTGTGGGC AGGATTGGAC 
    CTAGAGCATA TCGGATGTAC CGCTGCATTG TTAGGTATGG TTACAAAGAT 
    GTTCAGAGAG ATGATGACAA TTTTGAGAAC ATGTTAGTTA TGAACATTGG 
    GAAGTTCATT ATGATGGAAG CTGAGGATGC ATCTTCTTCA GCAAGTTATG 
    ATACTGCTAA TGAAGGACGA ATGGCCGTCA TAACAACATC TGATGACTAT 
    GACTCTCCAC TAGCTGTGAG AGATTCCAAT GACCTAGCTG ACTCCATGAC 
    GATGAGGAGC ACTAAATCAG AGAGTCTTCG AAGCTTGCAA TCCTCTTATG 
    AGCAGGAATC ACCTAATGTG AGCCGGAGGC GACGTGTTCG CTTTGAGCTG 
    CCAGAGGAGG ATGACATGGA TCAACAGGTT AAAGATGAGC TGTTAGCACT 
    TGTGGAGGCA AAACATACAG GGGTAACCTA CGTCATGGGG CATGTCTATA 
    TCAAAGCTAG GAAGAACTCT AGTTTTTTTA AGAGATTTGC AATTGATGTT 
    GGCTACTCTT TCCTCCGGAA GAACTGCAGA GGTCCATCGG TCACACTGCA 
    CATTCCACAT ATTAGTCTGA TAGAAGTTGG AATGGCGTAC CAAGTGTAGC 
    GCGATGCTCA TCGCAGGTCA CGACGTCACG TGGATACCCG GTAGCAACAA 
    ATCATGTGCT ACCTGTGGCC GCCTTTTTGG AGTCGAGGCT TTGATTCCTA 
    TGCTTTATCC ATGCGTTTTC AGTTTCAGTT GGTACAGATG AAGAGGCTCT 
    CTATGTTAAT ATGATCATTT AGCTCAAATA AAGCATCAGA TCTAATGATC 
    GTAGTTTGCT CTTCCCTTTT GGTATATTTA CATGCATGCT CTGTAATTTT 
    TATGGGAGCT ATGTAATGGA AATATGCGTC CCCGTTTTTA TTGCAGCTAT 
    GTAATGGAAA TATGCGTTCT CGTAGCTGAT ATATCCCAAT TTTTGTTAGG 
    AAGCGATTAC CACATATATT CTTTCATGTA TGAATTTCTT ATGGAACAGA 
    ACATCTGTAG ATATACAGTG CCTCGTGGAA TTTCTCTGCA AATAAACCAG 
    ATACTAGATA ACT

    Gene models with high sequence identity

    1. AT3G02050.1 [+] show detail - K+ uptake transporter 3
      E-value: 0; Score: 907.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMTigr Potassium uptake protein, kup 3.3e-246
    HMMPfam K+ potassium transporter 1.2e-269

    See the detailed result >

    AT3G02050.1

    Model type
    Protein coding
    Short Description
    K+ uptake transporter 3
    Curator Summary
    potassium transporter KUP3p (KUP3)
    Computational Description
    K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR