K21750

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21750

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21750

Determination of introduced cDNA(s)

J033024M24 - Rice Full-length cDNAs - Original: J033024M24

full reading [+] show sequence

GTTCAGCAGC GCATGCACTA GCAGCTTAGC TACTGCGCGC GTACCAGAGA 
GAGATCATCA GCTCAAGTAG CTAAGCTAGC TATAATCTGC TAGCTAGCTC 
GATCAGACAC TTAATTACCT GCTAGGTGGT GGTCGATCGA AGAAGAAGAA 
GATGAGTGAG CTTGCGTCGG CGCCCAAGGT GGCGCTTGGA TCGATCGCGT 
TCGCGGTGTT CTGGATGATG GCGGTGTTCC CGTCGGTGCC GTTCCTGCCG 
ATCGGGCGGA CGGCGGGGTC GCTGCTGAGC GCGGTGCTGA TGGTGATATT 
CCACGTGATC AGCCCCGACG ACGCGTACGC CTCCATCGAC CTCCCAATCC 
TGGGCCTCCT CTTCGCCACC ATGGTGGTGG GCAGCTACCT CCGGAACGCC 
GGGATGTTCA AGCACCTGGG GCGTCTGCTG GCGTGGAAGA GCCAGGGCGG 
GCGCGACCTC ATGTGCCGCG TCTGCGTCGT CACCGCCCTC GCCAGCGCCC 
TCTTCACCAA CGACACCTGC TGCGTCGTCC TCACCGAGTT CGTCCTCGAG 
CTCGCCGCCG AGCGCAACCT CCCCGCCAAG CCCTTCCTCC TCGCCCTCGC 
CTCCAGCGCC AACATCGGCT CCGCCGCCAC CCCCATCGGC AACCCCCAGA 
ACCTGGTCAT CGCCTTCAAT AGCAAGATCA CCTTCCCCAA GTTCCTCATG 
GGAATCCTCC CGGCCATGCT CGTCGGGATG GCCGTCAACA TGGTCATGCT 
GCTCTGCATG TACTGGAGGG AGCTGGGCGG AGGGGCCGAG CTCAGCGTCG 
ACGGCAAGCA GATGGAGGCG GTGGAGGAAG GCAGGTCGCC GGCGTCGGCC 
AAGAGCACGC CGCAGCTGAA CGGCAACGGC AACACGATGA TGTCGCTGGA 
GATGTCGGAG AACATAACGA CCAAGCACCC ATGGTTCATG CAGTGCACGG 
AGGCGCGGCG GAAGCTGTTC CTCAAGAGCT TCGCGTACGT GGTGACGGTG 
GGGATGGTGG TGGCCTACAT GGTGGGGCTC AACATGTCGT GGACGGCCAT 
CACCACGGCG CTGGCGCTGG TGGTGGTCGA CTTCCGCGAC GCCGAGCCGT 
GCCTGGACAC CGTGTCCTAC TCGCTGCTCG TCTTCTTCTC CGGGATGTTC 
ATCACCGTCA GCGGCTTCAA CAAGACGGGC CTCCCGGGAG CCATCTGGGA 
CTTCATGGCC CCCTACTCCA AGGTCAACAG CGTCGGCGGC ATCTCCGTCC 
TCTCCGTCAT CATCCTCCTC CTCTCCAACC TCGCATCAAA CGTACCAACG 
GTGCTTCTTA TGGGTGATGA GGTGGCGAAG GCGGCGGCGC TGATATCGCC 
GGCGGCGGTG ACGACGTCGT GGCTGCTGCT GGCGTGGGTG AGCACGGTGG 
CGGGGAACCT GTCGCTGCTG GGGTCGGCGG CGAACCTGAT AGTGTGCGAG 
CAGGCGAGGA GGGCGCCCAG GAACGCCTAC GACCTCACCT TCTGGCAGCA 
CATCGTCTTC GGCGTCCCAT CCACCCTCAT CGTCACCGCC GTCGGCATAC 
CCCTCATCGG CAAGATCTGA TCTCATCTCA TCGACCCATC CAAATTAATT 
AATTATGAGA TCGACAAACA TCCAAGCTTG CTAGGCTCGT CGTCGTCGTC 
GTCGACCACC GTACCATATA TATGCATGCA TGCCACGCAC GTATATATAT 
GCTCCTCAAC CTCAAGTCAA TTAATTAAGA GAATGGATGA ATGAATCAAT 
GTTGTGTATG ATTTCCTTTT TGTTTTTGTT TTACCCACCG TATATGTGCT 
GTGTGGTGTA TGGCCGGCGA GCTTGAAATT GAATTGGCCT TGCTTGCATG 
CATGCATGGT GATCAGATCA GCTCAGCTAG CTAGCTAAAT CTTGCTTAAT 
TTTATCAAGT GTCAATCATG ATGAGAAGAG AGGGAACTAG ATGGAGCTAG 
CTAGCTAGCA ACACATGCAG TGTGTGCTAA GCAGTGCACT CTGCATGCTT 
AAATTTGCTT GCTTAATTCA ACATCGTATT ACATGTATGT TGATATGTGC 
ATGTTCCTCA AAATACATGG AAAAAAAATG TTTCT

Gene models with high sequence identity

AT1G02260.1 [+] show detail - Divalent ion symporter
E-value: 2e-134; Score: 477.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Divalent ion symporter	4.5e-94
HMMPanther	ARSENITE TRANSPORT PROTEIN	1.7e-192
HMMPanther	CATION TRANSPORTER RELATED	1.7e-192
FPrintScan	PRICHEXTENSN	6.8e-09
FPrintScan	PRICHEXTENSN	6.8e-09
FPrintScan	PRICHEXTENSN	6.8e-09
FPrintScan	PRICHEXTENSN	6.8e-09

See the detailed result >

AT1G02260.1

Model type: Protein coding
Short Description: Divalent ion symporter
Computational Description: Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink).
Link: InterPro Scan - TAIR