K21750

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21750

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21750

Determination of introduced cDNA(s)

  • J033024M24 - Rice Full-length cDNAs - Original: J033024M24

    full reading [+] show sequence

    Nucleotide sequence: J033024M24 - full reading 
    GTTCAGCAGC GCATGCACTA GCAGCTTAGC TACTGCGCGC GTACCAGAGA 
    GAGATCATCA GCTCAAGTAG CTAAGCTAGC TATAATCTGC TAGCTAGCTC 
    GATCAGACAC TTAATTACCT GCTAGGTGGT GGTCGATCGA AGAAGAAGAA 
    GATGAGTGAG CTTGCGTCGG CGCCCAAGGT GGCGCTTGGA TCGATCGCGT 
    TCGCGGTGTT CTGGATGATG GCGGTGTTCC CGTCGGTGCC GTTCCTGCCG 
    ATCGGGCGGA CGGCGGGGTC GCTGCTGAGC GCGGTGCTGA TGGTGATATT 
    CCACGTGATC AGCCCCGACG ACGCGTACGC CTCCATCGAC CTCCCAATCC 
    TGGGCCTCCT CTTCGCCACC ATGGTGGTGG GCAGCTACCT CCGGAACGCC 
    GGGATGTTCA AGCACCTGGG GCGTCTGCTG GCGTGGAAGA GCCAGGGCGG 
    GCGCGACCTC ATGTGCCGCG TCTGCGTCGT CACCGCCCTC GCCAGCGCCC 
    TCTTCACCAA CGACACCTGC TGCGTCGTCC TCACCGAGTT CGTCCTCGAG 
    CTCGCCGCCG AGCGCAACCT CCCCGCCAAG CCCTTCCTCC TCGCCCTCGC 
    CTCCAGCGCC AACATCGGCT CCGCCGCCAC CCCCATCGGC AACCCCCAGA 
    ACCTGGTCAT CGCCTTCAAT AGCAAGATCA CCTTCCCCAA GTTCCTCATG 
    GGAATCCTCC CGGCCATGCT CGTCGGGATG GCCGTCAACA TGGTCATGCT 
    GCTCTGCATG TACTGGAGGG AGCTGGGCGG AGGGGCCGAG CTCAGCGTCG 
    ACGGCAAGCA GATGGAGGCG GTGGAGGAAG GCAGGTCGCC GGCGTCGGCC 
    AAGAGCACGC CGCAGCTGAA CGGCAACGGC AACACGATGA TGTCGCTGGA 
    GATGTCGGAG AACATAACGA CCAAGCACCC ATGGTTCATG CAGTGCACGG 
    AGGCGCGGCG GAAGCTGTTC CTCAAGAGCT TCGCGTACGT GGTGACGGTG 
    GGGATGGTGG TGGCCTACAT GGTGGGGCTC AACATGTCGT GGACGGCCAT 
    CACCACGGCG CTGGCGCTGG TGGTGGTCGA CTTCCGCGAC GCCGAGCCGT 
    GCCTGGACAC CGTGTCCTAC TCGCTGCTCG TCTTCTTCTC CGGGATGTTC 
    ATCACCGTCA GCGGCTTCAA CAAGACGGGC CTCCCGGGAG CCATCTGGGA 
    CTTCATGGCC CCCTACTCCA AGGTCAACAG CGTCGGCGGC ATCTCCGTCC 
    TCTCCGTCAT CATCCTCCTC CTCTCCAACC TCGCATCAAA CGTACCAACG 
    GTGCTTCTTA TGGGTGATGA GGTGGCGAAG GCGGCGGCGC TGATATCGCC 
    GGCGGCGGTG ACGACGTCGT GGCTGCTGCT GGCGTGGGTG AGCACGGTGG 
    CGGGGAACCT GTCGCTGCTG GGGTCGGCGG CGAACCTGAT AGTGTGCGAG 
    CAGGCGAGGA GGGCGCCCAG GAACGCCTAC GACCTCACCT TCTGGCAGCA 
    CATCGTCTTC GGCGTCCCAT CCACCCTCAT CGTCACCGCC GTCGGCATAC 
    CCCTCATCGG CAAGATCTGA TCTCATCTCA TCGACCCATC CAAATTAATT 
    AATTATGAGA TCGACAAACA TCCAAGCTTG CTAGGCTCGT CGTCGTCGTC 
    GTCGACCACC GTACCATATA TATGCATGCA TGCCACGCAC GTATATATAT 
    GCTCCTCAAC CTCAAGTCAA TTAATTAAGA GAATGGATGA ATGAATCAAT 
    GTTGTGTATG ATTTCCTTTT TGTTTTTGTT TTACCCACCG TATATGTGCT 
    GTGTGGTGTA TGGCCGGCGA GCTTGAAATT GAATTGGCCT TGCTTGCATG 
    CATGCATGGT GATCAGATCA GCTCAGCTAG CTAGCTAAAT CTTGCTTAAT 
    TTTATCAAGT GTCAATCATG ATGAGAAGAG AGGGAACTAG ATGGAGCTAG 
    CTAGCTAGCA ACACATGCAG TGTGTGCTAA GCAGTGCACT CTGCATGCTT 
    AAATTTGCTT GCTTAATTCA ACATCGTATT ACATGTATGT TGATATGTGC 
    ATGTTCCTCA AAATACATGG AAAAAAAATG TTTCT

    Gene models with high sequence identity

    1. AT1G02260.1 [+] show detail - Divalent ion symporter
      E-value: 2e-134; Score: 477.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Divalent ion symporter 4.5e-94
    HMMPanther ARSENITE TRANSPORT PROTEIN 1.7e-192
    HMMPanther CATION TRANSPORTER RELATED 1.7e-192
    FPrintScan PRICHEXTENSN 0.0000000068
    FPrintScan PRICHEXTENSN 0.0000000068
    FPrintScan PRICHEXTENSN 0.0000000068
    FPrintScan PRICHEXTENSN 0.0000000068

    See the detailed result >

    AT1G02260.1

    Model type
    Protein coding
    Short Description
    Divalent ion symporter
    Computational Description
    Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR