K21851

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21851

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21851

Determination of introduced cDNA(s)

  • J033143K18 - Rice Full-length cDNAs - Original: J033143K18

    full reading [+] show sequence

    Nucleotide sequence: J033143K18 - full reading 
    GACTACACTA CACTGCAATA CGGCAATGGC AATGGCGACC ATCCCGGAGG 
    TGCCTGCGAG CGCGCTGCTC CCGACCATGC CGCGCATCGG CATGGGCACG 
    GCGGCGTTCC CCTTCACCTC CTCCGAGGAA ACCACGGCGG CGCTGCTCCG 
    CGCCATCGAG CTCGGCTACC GCCACTTCGA CACGGCGAGG CTGTACGCGA 
    CGGAGGGCTG CGTCAGCGAG GCCGTCGCGG AGGCCGTCCG GCGCGGCCTC 
    GTCGCCTCCC GCGCCGACGT GTTCGTCACC TCCAAGCTCT GGTGCAGCGA 
    CCTGCACGCC GGCCGCGTCG TGCCGGCGGC GAGGGAGACG CTCCGCAACC 
    TCGGAATGGA CTACGTCGAC CTGCTCCTCG TCCACTGGCC GGCGACCGTG 
    GCGCCGGGCA GCTACGACTT CCCGTTCCCC AAGGAGGAGA TGGCGCCGGC 
    GTTCGACATG GAGGGCGTGT GGCGCGGCAT GGAGGAGTGC CACCGGCTGG 
    GCCTCGCGCG CGCCATCGGC GTCAGTAACT TCTCCGCCAA GAAGCTGGAG 
    CAGCTGCTGT CGTTCGCCGT GGTTCGGCCG GCGGCGAACC AGGTGGAGAT 
    GAACCCGATG TGGCAGCAGA GGACGCTGCG GGAGGTGTGC CGGCGAGAGG 
    GGGTGCAGCT GTGCGGGTAC TCGCCGCTGG GGGCGAAGGG CACGCCGTGG 
    GGCAGCGCCG CGGTGATGGA CTCCGGCGTC CTGCACGACA TCGCCCAAAC 
    CAAGGGCAAG ACGCTTGCTC AGATTTGTTT GAGGTGGATG TACGAGCAGG 
    GTGATGTTTT GTTAGTGAAG ACATACAATG AAAATAGGAT GAAGGAGAAT 
    CTTGATATTT TCGACTGGGA GCTCACTGAG GAAGAGAGAG ACAAAATCAG 
    CAAACTCCCC CAGCAGAGGG GTCTGACTGG AATGCAGTTC GTCTGTGACA 
    ATGGGCCTTA CAAGTGCGTC GAAGATTTGT GGGATGGTGC TTAACATGTC 
    GCAGGCTGGC CCTATGCACC AATAATCTGG ATGGATCATG CTTGCTGGGG 
    ATCTAGCAAA ATAATTTGTA ATTCAATTTT AATCTTCTGT CTTCTCGCAA 
    AATAATTGTG TGAAATGGAG CGCCAGATGT GCTCAATTGT TATCTTTCTT 
    CTATTCGTAA TCGATAAATA TGGTATTTTC CAAAATAATA TTGAAATTTC 
    GAGATATT

    Gene models with high sequence identity

    1. AT1G59960.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
      E-value: 2e-90; Score: 329.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Aldo/keto reductase 7.5e-85
    HMMPfam Aldo/keto reductase 3.6e-56
    Gene3D Aldo/keto reductase 1.3e-84
    HMMPanther ALDO-KETO REDUCTASE 3.7e-88
    HMMPanther Aldo/keto reductase 3.7e-88
    FPrintScan Aldo/keto reductase subgroup 1.4e-42
    FPrintScan Aldo/keto reductase subgroup 1.4e-42
    FPrintScan Aldo/keto reductase subgroup 1.4e-42
    FPrintScan Aldo/keto reductase subgroup 1.4e-42
    FPrintScan Aldo/keto reductase subgroup 1.4e-42
    PatternScan Aldo/keto reductase, conserved site 0
    PatternScan Aldo/keto reductase, conserved site 0
    PatternScan Aldo/keto reductase, conserved site 0

    See the detailed result >

    AT1G59960.1

    Model type
    Protein coding
    Short Description
    NAD(P)-linked oxidoreductase superfamily protein
    Computational Description
    NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR