K22105

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22105

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22105

Determination of introduced cDNA(s)

  • J013030P09 - Rice Full-length cDNAs - Original: J013030P09

    full reading [+] show sequence

    Nucleotide sequence: J013030P09 - full reading 
    GTGGAGCAGT TGACTTTCTA GTGAAGCCTA TACGTAAGAA TGAACTTAAG 
    AACCTTTGGC AGCATGTTTG GAGACGATGC CACAGTTCCA GTGGCAGTGG 
    AAGCGAAAGT GGCATCCGAA CACAAAAGTG TACCAAACCA AAGGTTGATG 
    ATGAATATGA GAATAACAGC GGTAGCAATA ATGACAACGA GGATGATGAT 
    GACAATGATG AAGATGATGA CGACTTAAGT GTTGGACACA ACGCTAGGGA 
    TGGCAGTGAT AATGGCAGTG GCACTCAAAG TTCATGGACA AAGCGTGCAG 
    TGGAGATTGA CAGCCCACAA CAAATGTCTC CTGATCAACC ATCCGATCTA 
    CCAGATAGTA CTTGTGCGCA AGTAATTCAC CCCACATCAG AGATATGCAG 
    CAACAGGTGG TTACCGACTG CAAATAAAAG GAGCGGAAAG AAACATAAAG 
    AAAATAACGA TGACTCCATG GGGAAGTACT TAGAAATAGG AGCTCCTAGA 
    AATTCTAGTA TGGAGTACCA ATCTTCTCCA AGAGAGATGT CCGTTAATCC 
    AACAGAAAAA CAGCATGAAA CTCTCATGCC CCAAAGTAAA ACAACAAGAG 
    AAACAGATAG TAGGAACACA CAGAATGAAC CAACTACTCA AACTGTTGAT 
    TTAATTAGTT CAATAGCCAG AAGCACAGAT GACAAACAAG TAGTTAGAAT 
    CAATAATGCT CCTGATTGCT CCTCCAAGGT TCCAGATGGA AATGATAAAA 
    ATCGTGATTC TCTCATTGAT ATGACATCTG AAGAGTTGGG TTTGAAGAGA 
    TTGAAAACGA CTGGATCTGC AACTGAAATC CATGATGAAC GAAATATTCT 
    GAAAAGATCA GATCTCTCAG CTTTCACCAG GTGCAAAAAA TAATATCAGT 
    GTCACTCCTG AGTTATGAAC ATGGCAATAA ATTGCGTACT AATGTTTTCT 
    TATCTTGCAA GGTACCATAC AACTGTGGCT TCTAATCAAG GTGGAGCTGG 
    ATTTGGGGGA AGCTGTTCAC CTCAAGATAA CAGTTCAGAG GCTCTGAAAA 
    CAGACTCCAA CTGCAAGGTG AAGTCAAATT CAGATGCTGC TGAAATAAAG 
    CAAGGCTCCA ATGGTAGTAG C

    Gene models with high sequence identity

    1. AT5G02810.1 [+] show detail - pseudo-response regulator 7
      E-value: 1e-31; Score: 134.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G02810.1

    Model type
    Protein coding
    Short Description
    pseudo-response regulator 7
    Curator Summary
    PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.
    Computational Description
    pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR