K22121

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22121

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22121

Determination of introduced cDNA(s)

J023108J12 - Rice Full-length cDNAs - Original: J023108J12

full reading [+] show sequence

GAGTCCCCCA TTGATGACCT CCGCCGCCAC CGCCGTAGAT GCACAGGCTC 
TCCTTCCTCC AGGCCACCAT CATTGACGCG CCGCGGTGGG GGCGGCGAGT 
CGGAGTCGGA GAATGAGGAG GAGGAGGAGA AGCGGGGGGG CAGGGCGGGG 
GAGAGGAGGC TCAGAGGCGG CGGGAGCGCC GCGGCGGCGG CGGCGGCGGC 
GGGGAGCGGG GAGCTCCTCT CCATCCCCGG CGTGGGGCCT CGCAACCAGA 
GGAAGCTCGT GGACAACGGA TTCGAGGGCG TCGCGCAGCT TAAGCAGCTC 
TATCGGGATA AGTTCTTTGG AAAATATAGC GAGAAGATGG TTGAGTTTTT 
ACAGAGCTCG GTTGGCATCA TTCATAAGAA CCATGCTGAG AGTATAACTT 
CTTTCATTAA GGAGAGTGTT GATGAGGAGC TGAAGGATGC AGACTCATCT 
AAGGCTTCTC AGAAGAAGAG GCTCACCTTT TGCGTGGAAG GGAATATTAG 
TGTTGGGAAG TCTACCTTTC TCCAAAGAAT AGCTAATGAG ACCATCGAAC 
TGCGTGATCT TGTAGAAATA GTGCCTGAAC CTGTTGCTAA GTGGCAGGAT 
ATTGGCCCTG ACCACTTCAA TATATTGGAT GCTTTCTATG CTGAGCCACA 
TAGGTATGCC TATACCTTTC AAAATTATGT GTTTGTGACA AGGGTCATGC 
AAGAAAGGGA ATCTTCAGGT GGAATAAAAC CTCTCAGACT GATGGAAAGA 
AGTGTTTTCA GTGATAGGAT GGTATTTGTT CGTGCTGTTC ATGAAGCTAA 
CTGGATGAAT GAGATGGAGA TCAGCATTTA CGACTCATGG TTTGATCCTG 
TTGTGTCATC GCTTCCAGGT CTTATCCCTG ATGGATTTAT CTATCTAAGA 
GCTAGCCCAG ATACTTGCCA CAAAAGAATG ATGCTCCGGA AAAGAGCAGA 
GGAAGGTGGT GTTACTCTTG ACTACTTGCA AGGTTTGCAT GAGAAACACG 
AGAGCTGGTT GCTTCCTTCA AAAGGAGGAG GTACTGGTGT GTTATCTGTC 
AGTCAGCTGC CCACACATTT GGAAGGTTCC TTGCCTCCAG CAATTCGAGA 
TCGTGTCTTT TACTTGGAAG GAGATCACAT GCACTCAAGC ATCCAGAAGG 
TCCCTGCTCT GGTCTTGGAT TGTGAACCTG ACATTGATTT CAACAAAGAT 
ATAGAAGCTA AACGGCAATA TGCTCAGCAA GTTGCAGAAT TCTTTCAATT 
TGTGAAGAAA AAGAAGGAAG CTCCATCTGA ACAAACAAGC ACTGACAAGA 
ACCGTATCAA TCCACAGATC ATGCTTCCTC ACAAAGGCGG ATTGTGGGTT 
CCTGATGGAA GAAACCCTTT CTCAGGATCT GCTATGAATC TGAACTTCAG 
AAGAGCCATG TCTTCCTATC TCTCGACATA GGATTTCAGC TCCAGAATGA 
ACGTAGGATC TTACAAATCC CACTCTCACT GACCTTGTAA ATGGGCCTAT 
GCGTTAAGTT AAACCTAGGT TAGCCACTGA TGTAAGATAG TCTGCCACCG 
CATCTCCATC TTTTGTAAAT GATCATCTTC CACCCTTTCC GAGTTCCATG 
TTTTGTAGTA GCGTCAGCTT CCGTTTGTCT GAGTTCTGGT ATCTGTATCG 
TTATGTTGGT TGCTGACTAC ATTCTGTTAG ATGATCCGGA ACTCTTTGAC 
ATTTCTGGGA AAGATGCTTC AGTACTTGCC GTTTGTTTGT C

Gene models with high sequence identity

AT1G72040.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
E-value: 2e-168; Score: 589.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	DEOXYGUANOSINE KINASE-RELATED	8.9e-224
HMMPanther	Deoxynucleoside kinase	8.9e-224
HMMPfam	Deoxynucleoside kinase	6.9e-27
superfamily	P-loop containing nucleoside triphosphate hyd	6.1e-47
Gene3D	no description	1.8e-50

See the detailed result >

AT1G72040.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink).
Link: InterPro Scan - TAIR