K22209

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22209

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22209

Determination of introduced cDNA(s)

  • J023019B01 - Rice Full-length cDNAs - Original: J023019B01

    full reading [+] show sequence

    Nucleotide sequence: J023019B01 - full reading
    GCGTGGATTG ATTTGGGTGA CATGGTGCAA CACCATAGGG CCACCCTCCT 
    GCTGCACCAG CAGCAGAGGA AAGGGGATGC GACGGCAGAG GAGGGGCAGC
    AGCTGGTGGC CGAGGAAGGA GCCGGCAAGA TGAAGGAGCT CCGGCGCCGG
    CTCGTGGACT ACGCGTGCCA CCACCGGAAG CACGGCCACG ACGCGCTGCT
    GCGGATGCTC GCGGGGTTCG CGCTTGTCTC CTGCCTGCTG CTGCTGCTGC
    CAGGGAGCCC TTTCTCAGCC GCGGTCGACG ACCTGCTGCA GATGGGGAGG
    ACGCGCCTGG ACGACGAGAC GCCGCCGCCG CCGCCGTGCG CGGCCGTGTC
    CAACGGCACC ATCTGCTGCG ACCGCACCGC CATGCGTACG GACGTGTGCA
    TCATGCGCGG GGACGTCCGG ACGGAGGCCG CTTCCAATTC TCTCTTCTTG
    CTCGTGCCGC CGCCGGACAA TTCCACCGCC GCCGCTGGCC GGGACGAGCG
    CATCCGCCCT TACACCCGGA AGTGGGAGTC CAGCATCATG AGCACCATCG
    ACGAGCTCCG GCTCCGTGCC GTGCCCGAGG GGGGTGCGGC GCCGGCTAGC
    TGCGACGTCC GGCACGACGT CCCAGCCGTC GTGTTCTCCA CCGGCGGGTA
    CACCGGCAAT GTGTACCACG AGTTCAATGA CGGCATAATC CCGCTCTACA
    TCACCGCGCG CCAGTACAAC AAGAAGGTGG TGTTCGTCAT GCTCGAGTAC
    CACGACTGGT GGATGACCAA GTACGGCCAC ATCGTCGAGC AGCTCTCCGA
    TTACGCGCCT ATCGACTTCA CCAACGACCG CCGCACCCAC TGCTTCCCGG
    AGGCCGTCGT TGGGCTGCGC ATCCACGACG AGCTCGCCAT CGACGCCGCA
    CGAATGCCGG GCAACCGTAC CATCCAGGAC TTCCGTCGGA TGCTCGACGA
    CGCATACCGC GGCCGCATAC AGATGATCAT CGAGGAGGAG GAGAAGGCCG
    CGGCGGTGGC CTTGGGGACG CCGACCCAAG GCAGCATCAG GAAGAAGAGC
    GCGCTCAAGG ACGACAAGCC ACGACTGGTG ATCGTGTCAC GGAACGGGTC
    GCGCGCGATC GAGAACGAGG CCGAGCTGGT GCGTGCAGCT GCTGGCGCCG
    GGTTCCGCGT CGCCGTGCTC CAGCCTCGTC AGGATACGGA GCTCGCCAAG
    ATGTACCGTG CTCTGAACGC ATCGGACGTC ATGGTGGGCG TGCACGGCGC
    GGCCATGACG CACTTCCTCT TCATGCGGCC GGGCTCCGTC TTCATCCAGG
    TCGTTCCGCT CGGCACCGAC TGGGCCGCCG AGACATACTA CGGCGAGCCG
    GCGCGGCGGC TCGGGCTGCG GTACATGCCG TACAAGATCA AGCCGGCGGA
    GAGCTCGCTG TACCGGCAGT ACGCCAAGGA TGACGCGGTG CTCACCGACC
    CGGACACCGT GAACGCCAAG GGGTGGCAGG TCACCAAGAA GGTTTACCTC
    GATGGCCAGA ACGTGCGGCT GGACATGGTA CGGTTCCGTC GCCGGCTGCG
    CGACGCGTAC GACCACTGGG CGGAGCTGAG GAGGCGCCAC AACGCGGACA
    GTACTGAGAC GGAACAGCGG AAACCATGGT AGGAGTAGGA GTAGCATGGT
    CTCCTACCGA GTTCTTTTGA TTAATTCTTT CTCTTTTTGA CACATATACA
    TGGTTAATTC AAATACTGTA TAGAGAAATT CAGGGAGATA GTTGCTTTAC
    ATGCCACCAG TTTGATGGGA TGAGTGACAC CTGTTAATGG ACTACAGCTG
    TTAATGT

    Gene models with high sequence identity

    1. AT2G41640.1 [+] show detail - Glycosyltransferase family 61 protein
      E-value: 5e-134; Score: 475.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Glycosyltransferase AER61, uncharacterised 1.3e-105
    HMMPanther GLYCOSYLTRANSFERASE 1.8e-116

    See the detailed result >

    AT2G41640.1

    Model type
    Protein coding
    Short Description
    Glycosyltransferase family 61 protein
    Computational Description
    Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1); Has 674 Blast hits to 674 proteins in 105 species: Archae - 0; Bacteria - 55; Metazoa - 158; Fungi - 12; Plants - 386; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR