K22337

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased width (PATO:0000600) (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22337

Determination of introduced cDNA(s)

J013001I07 - Rice Full-length cDNAs - Original: J013001I07

full reading [+] show sequence

GAAGGAGGAG GCAGGAGGCT GCCATAACTC CGCCCGCAAC CTCCGCTCTC 
TGTCTCGCGG TGACCTCGTA CGTACCCCCG CGCTAGCTGT TAATGGAAAC 
GCCGCGCCCT CTCCTCCTCC CTTCCCATCA TCCTCCCGCG GCCTCGCCCT 
CCTCTTCTTC TTCTTCCTCC TCCTTCCCCT ACAGATAGCG AAGCGAGATG 
GATTGTTGTA GATAGGATAC GCATACTGTG GCTCTTCCCC CCTAGCTTCT 
TCCATCTCCT CGATCGTGTT CAGTTTGATT TTGGTTTTCG CTTGTCACTG 
TGTGGGTGGT GGTGTTGTTG GCCATGGCGA GGAGTGGTGG GGAGTTGGTG 
GTGGTGGAGG AAGACGATGA GTACGCCAAG CTGGTCAGGA GGATGAACCC 
ACCCAGTGTT GTGATAGACA ATGACTCGTG CGACAGTGCA ACTGTCATCC 
GGGTTGATAG GGTCAAGAAG CATGGCATTT TACTGGAGGC TGTTCAAGTA 
CTTGTGGACC TCAACCTCGT CATCACCAAG GCTTACATTT CTTCAGACGG 
CAACTGGTTC ATGGACGTGT TCAATGTGAC CGATCAGGAC GGCAACAAGG 
TGCAGAACAA GGAGGTCACT GACTGCATTA AGAAATGCTT GGAGTCGGAG 
GATTACCTCG TGCTGCCGGC GAGCTCGCCG GCCGGCGGCG CTGCGCCGTC 
GGAGGAGACC ACCTGCATCG AGCTCACCGG CACCGACCGG CCGGGGCTCC 
TCTCCGAGGT GTGCGCCGTG CTGGCTTCGC TGAGGTGCAA CATCGTGAAC 
GCCGAGGTGT GGACGCACGA CCGCCGCGCC GCCGCCGTCA TCCAGATCAC 
CGACGAGGCC ACCGGCCTCC CCGTCCGCGA CGGCGGGCGG CTGTCCCAGC 
TGCAGGAGCT CCTCGGCAAC GTCATGCAGG GAGACGGCGA CGGCGGCGGT 
GACAGCAGGA AGGGCAGCAC GGCCGTGTCG CTGGGCGCCG CGAACGCCGA 
GCGGCGCCTG CACAGGCTCA TGCTCGACGA CGGCGACGCC GGCCGATGCG 
GCGAGGAGCG GGGCGGCGTG GCGGCGGCGA AGGCGAAGGC GAAGGTGGTG 
GTGATGGACT GCACGGAGCG GCGGTACACG GTGGTGATCC TCCGGTGCAG 
GGACCGGCCG CGGCTGCTGT TCGACACGCT GTGCGCGCTC ACCGACCTGC 
ACTACGTCGT CTTCAACGGC ACCGTCGACG CCGAGGGCGG CAGCGCCAAG 
GAGGCCTACC AGGAGTACTA TGTCCGGCAC GTCGACGGCC ACCCGGTGCG 
CTGCGACGCC GAGCGCCTCC GCCTCGTCCG CTGCCTCGAG GCCGCCGTCG 
AGCGCCGCGC CTCCGACGGG CTGGAGCTGG AGGTGAAGAC GGAGGACAGG 
GCGGGGCTCC TGTCGGAGAT CACGCGTGTG TTCCGGGAGA ACAGCCTGTC 
GATCATCCGG GCGGTGATCA CCACCAAGGA CGGCGAGGCC GACGATACCT 
TCTACGTCTC CGACGCCTAC GGCAACCCCG TCGACGGCAA GGCCATGGAG 
GCGCTCGGCG AGCAGCTCGG CCACGCCGTG CTGCGCGTCA AGAGCAACGG 
CCGCGCCGCC ATCAACCGCG CCGAGGACAG CGGCGGCGGC GGCGCGGCGG 
CCATCATTGG CAACCTGCTC AAGGGCTCGT TCCAGGGGTT CAGGCTCATC 
AGATCCTACT CCTGAAAAAA AAAATTGCTC ATTTTCTCAC CAAGAAGATC 
AGAAACACGA CCTTGTTCAT ACATAAGAAT CTGACGACTT TAGCTTAGGA 
AATAAATGGA GAATGGGGTG ATGTAAATAG TCTTGTGGAT ATCTGAAAAC 
GCCATTGCTT CTTCAGCATC ATACACTTAG GTTAAGGTTA ACTTGCATTG 
TACATATAAT TTGTAAAGTG GTTCTCATCT AAAATTTGTG GTTAAACCCC

Gene models with high sequence identity

AT1G69040.2 [+] show detail - ACT domain repeat 4
E-value: 1e-118; Score: 424.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	0.00034
superfamily	ACT-like	2.6e-15
superfamily	ACT-like	4.4e-11
superfamily	ACT-like	3.4e-10
HMMPfam	Amino acid-binding ACT	3.7e-05
HMMPfam	Amino acid-binding ACT	6.4e-09
HMMPfam	Amino acid-binding ACT	1.9e-07

See the detailed result >

AT1G69040.2

Model type: Protein coding
Short Description: ACT domain repeat 4
Curator Summary: ACT-domain containing protein involved in feedback regulation of amino acid metabolism
Computational Description: ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR