K22709

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22709

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22709

Determination of introduced cDNA(s)

J013164G01 - Rice Full-length cDNAs - Original: J013164G01

full reading [+] show sequence

TGGATATTTT ACGAGGTTCA AGTGGAGTGG TGTGGTGGAG GTGGAGCTGG 
TGGCAAGTCT GTGTCAACCA TGGCATCGCC CTCCGGCGCC GGCAAGCCAC 
CGGCCGTCCT CCTCCTCCGG CCGGTGGACC AGCCCTTCGC CGTCGCGCTG 
CGCGAGCGCT ACCGCGTGCT CGACCTCCTC TCCTCCGGCC AGCCTCTCCC 
GGCCTTCCTC GCCGCCGCCG CCGCCGCGCC TGACCCGCCG CGCGCCGCCG 
TCGTCATGGG GGGCGGCTCA ATCCGCGCCG ACGCGGCGCT CTTCGACGCC 
GTGCCTTCCC TGCGCTGCGT CGTCAGCACG GCGGCCGGCG TCGACCACAT 
CGACCTCGCC GAGTGCGCGC GCCGCGGCGT CGTCGTGGCC AACTCCGGGA 
CGGTGTACTC CGGCGACGTG GCCGACCACG CCGTGGGCAT GGTGATCGAC 
GTGATGAGGC GCGTGTCGGC GGCGGAGAGG TACGTCCGGC GAGGGCTCTG 
GCCGGTGCAG GGGGACTATC CTCTCGGCTC CAAGGTAAGC GGCAAGCGTG 
TGGGCATCAT CGGGCTTGGC AACATCGGTT CACTGATCGC CAAGAGGCTG 
GAAGCATTCG GCTGCGTCAT CTCCTACAAC TCAAGAAACC CCAAACGCTC 
GCTCCCCTAC ACCTACTACG CCGACGTCCG CGCCCTCGCC GCCGACTCCG 
ACGTGCTCGT CGTGTCGTGC GCGCTCAACA GCGAGACGCG CCACATCGTC 
GGCGGCGAGG TGCTGGACGC GCTCGGCGAG GGCGGCGTGG TGGTGAACGT 
GGGGCGCGGC GCGAACGTGG ACGAGGCGGC GCTGGTGAGG GCGCTGCGGG 
AGGGGAGGAT CGCCGGCGCC GGGCTGGACG TGTTCGAGGG CGAGCCCAAG 
GTGTCGCCGG AGCTGAGGGA GATGGAGAAC GTGGTGCTGA CGCCCCACGT 
GGCGGTGTGG ACGGCGGAGT CGAGGTCCGA CCTACGTGAC CACACGGTGG 
CCAACCTTGA CGCCTTCTTC TCCGGCGACC CGCTGCTCAC GCCGGTCATG 
CTTCCCTAAC CCACCACCTA CATACTCCAC GTACAGGTAA TTTCTATTGT 
TGCTATTCGT CTGGTTTCAT TCCATTTTTT GAGTAAATTT CATGTACTTA 
TCAATAGCGT GGTTCCGTGA AACTTTAATA CCAAATATAT AAATATGTAG 
TCAAGTGTCA AAATATATAT AGTTTTCTAC AGCTTGGATT

Gene models with high sequence identity

AT2G45630.2 [+] show detail - D-isomer specific 2-hydroxyacid dehydrogenase family protein
E-value: 3e-64; Score: 243.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	GLYCERATE DEHYDROGENASE	4.5e-133
HMMPanther	2-HYDROXYACID DEHYDROGENASE	4.5e-133
HMMPfam	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	1.9e-51
HMMPfam	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	3.7e-19
superfamily	NAD(P)-binding domain	3e-56
superfamily	Formate/glycerate dehydrogenase catalytic dom	1.9e-26
Gene3D	NAD(P)-binding domain	5.3e-53

See the detailed result >

AT2G45630.2

Model type: Protein coding
Short Description: D-isomer specific 2-hydroxyacid dehydrogenase family protein
Computational Description: D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR