K22713

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22713

Determination of introduced cDNA(s)

J033130M19 - Rice Full-length cDNAs - Original: J033130M19

full reading [+] show sequence

GACTCTTTCT CTCTCCCACT TCACCTCGCG ATCTCTCTCT CTCTCTTCCC 
CACCTCTACG CGCCTCCGCC TCCGCCTCCG CCATGGAGGT GTTCTACTAC 
CTCGTCTTCG GCGGGCTCGC CGCCGTCGTG GCGGGGCTGG AGCTCGGCAA 
GTCCGGCAAG GACCGCGTCG CCACCACCCC GGCCTTCAAC GCGTTCAAGA 
ACAACTACAT CCTCGTCTAC TCGCTCATGA TGTCTGGGGA TTGGCTGCAG 
GGGCCGTACG TGTACTACCT CTACAGCCAG TACGGCTTCG ACAAGGGTGA 
CATTGGCCGC CTCTTCATCG CCGGCTTCGG CTCCTCGATG CTCTTCGGCA 
CCATCGTCGG ATCCCTCGCC GATAAGCAGG GGAGGAAGAG GGCGTGCATT 
ACCTACTGCA TCAGCTACAT CCTGAGCTGC ATCACGAAGC ACTCGCCTGA 
GTACAAGATC CTGATGATTG GGCGCGTGCT CGGAGGCATC GCCACATCGC 
TGCTCTTCTC GGCGTTCGAG TCGTGGCTCG TCGCGGAGCA CAACAAGAGA 
GGATTTGACC CACAGTGGTT GTCGATAACA TTCTCCAAGG CTATATTTCT 
TGGAAATGGC CTAGTTGCGA TCATCGCTGG GCTATTTGCA AATCTGCTTG 
CAGATAACTT GGGTTTTGGG CCTGTTGCTC CATTTGATGC TGCTGCTTGC 
TTTTTAGCAA TAGGCATGGC AATCATCTTA TCATCATGGA GTGAGAACTA 
TGGAGATACA TCTGATAACA AGGATCTGAT AGCCCAATTC AAGGTTGCAG 
CCAAAGCCAT TGCTTCAGAT GAAAAGATTG CATTGCTTGG AGCTATACAG 
TCACTGTTTG AGGGTTCAAT GTACACTTTT GTTTTCCTGT GGACTCCTGC 
TTTGAGCCCA AATGATGAAG AAATTCCTCA TGGCTTCATA TTTGCCACAT 
TCATGCTCTC CTCTATGTTG GGTAGCTCAA TTGCCTCTCG TTTGTTAGCT 
CGGAAGCTGA AGGTTGAAGG TTATATGCAG ATTGTGTTTT CGATATCAGC 
TTTTACTCTT TTCCTCCCTG TTGTCACTAA CTTCCTAGTA CCTCCCTCCT 
CGGTCAAAGG TGGTGGCATC TCATTTGGAG GCTGTCTACA GCTGCTCGGT 
TTCTGTATAT TTGAATCCTG TGTTGGCATT TTCTGGCCAT CAATCATGAA 
GATGAGGTCC CAGTATATTC CTGAGGAGGC AAGAAGCACG ATCATGAACT 
TCTTCCGCAT ACCACTCAAC CTGTTTGTTT GTGTGGTTCT TTACAATGTG 
AATGCATTCC CCATCACTGT CATGTTTGGC ATGTGTGCTA TTTTCCTTTT 
CATGGCAGCA ATCTTGCAGA GGCGGCTGAT GGTTGTCTCT GATCTCCACA 
GATCAACAAA AGCTGTAGAG ATGACTGGGG AAGATGAGCC GTTAAACCCA 
TAGAAGACAA GACAATAGAT GTGAATTGGA CATGAAAATT GCCATCCAAC 
TTGAGCCGCT TTCCACTGGC TGCTGAATAA GCTGGAAAAT AGCAGGCTGG 
AATGAAACGT ACTAGTAGTA GTTTAGTTTG CTTGTAGGTA GTCTCAATTC 
ATTTTTGTCA GGAGAGAGTA CACGGTCCAG AAAATATTGA GCTACAGGCG 
GCATAGTAAC GCCTTGCATA GGTCTCCTTC CCATTCTTTT CCACTTTCTT 
CTCGAGTGTG ATGATCGATG CTTAACCATT TTGGATGCAA AACATATTGA 
GTAGTGTAAC AAATTTGGTG ATTGTTCCT

Gene models with high sequence identity

AT1G64650.1 [+] show detail - Major facilitator superfamily protein
E-value: 0; Score: 765.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Major facilitator superfamily, general substrate transporter	4.3e-24
HMMPfam	Protein of unknown function DUF791	5.5e-213
HMMPanther	SUGAR TRANSPORTER	0.00014
HMMPanther	SUGAR TRANSPORTER	0.00014

See the detailed result >

AT1G64650.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 889 Blast hits to 882 proteins in 311 species: Archae - 19; Bacteria - 505; Metazoa - 88; Fungi - 69; Plants - 135; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link: InterPro Scan - TAIR