K22801

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22801

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22801

Determination of introduced cDNA(s)

  • J013047M02 - Rice Full-length cDNAs - Original: J013047M02

    full reading [+] show sequence

    Nucleotide sequence: J013047M02 - full reading 
    GAGAAGGCCA GACCACCCCC AAAACCTCCT CGTTGGCCGT CCAGTGCGGC 
    GGAGAGAGAG AGGGAGGGAG GAAGGAGGCC GCCGCGCGAT GGGGGGCGAC 
    CTGTACGCGC TCGACTTCGA CGGCGTCCTC TGCGACAGCT GCGGCGAGAG 
    CTCCCTCTCC GCCGTCAAGG CTGCGAAGGT GAGGTGGCCA TGGGTGTTTG 
    AGCAGGTCGA CGCTGCCATG GAGGAGTGGA TCGTGGAGCA AATGTATACC 
    CTTCGCCCAG TGGTTGAAAC AGGATACGAG AATCTGTTGC TTGTCAGGTT 
    GCTTATTGAG ATTCGGATAC CCTCTGCCCG GAGATCATCG GTTGCAGATG 
    GGCTTAGCAT CCAAGAAATA CTGGAGAACT GGTTAAAACT GAAGCCCACA 
    ATTATGAGTG AATGGAATGA AGATAGGGAC TCTCTAGTTG ATCTCTTTGG 
    CAGCATAAGG GATGACTGGA TTGAAAATGA CTTGTCTGGT TGGATAGGTG 
    CTAACAGATT TTATCCTGGA ACAGCCGATG CATTAAAATT TTCAAGTTCA 
    GAAGTCTACA TAGTCACTAC AAAACAGGGC CGATTTGCTG AAGCACTATT 
    AAAAGAATTA GCGGGAATAG AATTTCCCTC TGAAAGGATA TATGGGCTTG 
    GCACTGGTCC AAAGGTAAAA GTTCTCCAGC AACTGCAGCA AATGCCACAG 
    CATCAAGGCC TGACACTTCA TTTCGTTGAG GACCGTCTTG CAACTTTGAA 
    GAATGTCATT AAAGAGCCAG CACTGGACCA ATGGAACCTC TACCTGGTGA 
    ACTGGGGCTA CAACACACCA AAAGAGAGGG AAGACGCAGA AGGTATATCA 
    AGGATCCAGG TCATTGATCT CCCTGGTTTC AGCCAAAAGC TCAAATAGTT 
    AAACCAATGC AAAAATCTTC CAAATGTATT ACGCATTTCT AGTGATCACT 
    TTGACTTGAT GTGCTTAAAC AGCACAGATA CTTGATTTTT TTCATTGAAT 
    ATACATTATT ATTTATGAAC TTACTGTTGA ACATTC

    Gene models with high sequence identity

    1. AT2G45990.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-106; Score: 382.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G45990.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR