K23031

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23031

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23031

Determination of introduced cDNA(s)

  • J013057C16 - Rice Full-length cDNAs - Original: J013057C16

    full reading [+] show sequence

    Nucleotide sequence: J013057C16 - full reading 
    GCGCTCGTCG CCACATCGCT TGCTTCCCCG TCACTCCCAC TATTTCCCAC 
    TCGTCGCCGG CGGCGAGCGA GCGAGCGATG ATCTCCGCGT CCCGGACGCA 
    AACCCCGCTC CCATCTCCAT GACTCCCGCG AACCCCACCC CGCTCCTCTC 
    CTCCCCACGC CCCAACCCTT CCCTCCCCCT CCCCCGCCGC GCCCGGCGCC 
    CCCACCCGCC GCCGGCGGCC AACACCACCG GCGCGGCCTC CACGCCGGAC 
    TGGTTCCGGC CTAGGGCGCC GCCCGACGCG GACCCGTCGA CATCCGGCGG 
    CCGCGTCGCC GCCCGGGATC CCGGGGTGCG CGTCAGGGCC AGGGAGGGCG 
    CGGAGGAGGA GAAGAAGGGG AGGGGAAGGG GGAGGAGGAG ATGGTGGGAC 
    TGGTGGTCCG GGGACAGGGA GAGCTACCTC GTCGACGACG TGGAGCCGCT 
    GCCGCTGCCG TTGACCGTTC CGGACACCGA GCCGATGTCC CGCGAGGAGC 
    TCGACCGCCG CCTCAGCTGC GACGTGGAGA TCGAGGATTG CAAGACTGTC 
    TCCTACGAGT GGACGGGCAA GTGCCGGAGT TGCCAGGGGA CAGGGCTGGT 
    GAGCTATTTC AGGAAGAAGG GGAGGGAGAC CATCTGCAAA TGCGTGCCAT 
    GCGCTGGCAT TGGTGAGATC CCTTGCTCGC ATTCCCAGTA TCGATCGAAT 
    TGCTCTCATT TGTAGGTGAT CGGAAATAGG GAATGGGGAT ATTACATGTA 
    TCCAGATCTT CTTGCTAGGA ATTGCTATTG TGAACTGGAA AGGGTGTAGT 
    TGCCTTCAGT TTAGGGGTGG CACTTGGTTA TCATTAAAAT ACAGTGTAGT 
    TTTGATGAGT TCTTTACTTT AGACAGATAA TTTACCATTC AGCCTTGGTC 
    TGCAGTTAGG ATGTTATAAA ATGATTTGCA TTAGTATGTA CTGAACATTT 
    CATGTCAAAC CTGTAAGTGC AGCTTTTGCC CCCTTTTATT CAAAGAAGGC 
    TGCAAATACC ACTGATAGTA CTAAATATCC AGTAAATATT GTGCACATAA 
    CCCTTGGTGC TAAAACCTTG CACAGAAAAG GAGATTTTGC TCAGAGATGC 
    CATTTCTCTT TATTGCTCTT CCTATTGTTG TTAAGTTGAG CAATTAGTCT 
    CGATTAGTCG GTGATTGTCA GCCCACACGA CCTGAAGCCC ACAACTCAAA 
    CAAATATAAA GTCGCATGAC TAGCTCGACT TATCAGCGAC TTTCAGTGAT 
    TAGTTGGTGC TCAGATCGAT GTGAAAGCAT GAACATGATA GCACTCCTGC 
    TCCACCTCAT GTAGTGCCTA TAATAATTAA TAGCCTGCCA TGTAGGATCA 
    AACCTAATGT GGCAAGAGAG TTAACGAAGT GTGTGAGAGA GAATCCATGT 
    CTTGCATGAG ACACTACCCA AGGCAAATAA ACCAACACAT CAAGAAACAA 
    ACAAAATAGC ATTAGGGGTT GAGGTAGTGT CTGTGGCACA AAACGAGAGG 
    CAAATCAACA AATAAGAGGG AGAGACGATG AGAGTAATTT ACTATTTGCA 
    TTGATCTCAC ACATAGAAAC TATGCATTGG ACAAATAGTA TTTTATAGCA 
    GTGTCCATAT GGCATGAAGT GGCATAGATG TCTAGCATTA GGAATGCCTT 
    GACAGCTGAA TCCAAATTAA GCATGCTAAT TGCAGATGCT AGCAACAATG 
    ATGAAAGTTT ATTTTAACAA TCAAGGATAG TAAATCAAAT ATCTTGTGTG 
    GAATGAACTA CTGATAAAAT TGTATACAGT GCCTCAGTTA TGTAGCTCCT 
    GAAATGCTGC AGATGAATAA TGGGATAACG GAACCTAGAA TTCAATGCTT 
    TAGAAATGTT CAGGAATAGC TGAAAAAGAG TGTTGTTTAC TGTTGGAATG 
    TTTTCCTCTA TGCTACTGAG TTCAGTTACC TGAGCTTTTC TAAGTACATT 
    GGAACTGATC TAATATGACT AAAATTGCCA TGATATGCTA CCGAAGTCAA 
    CAGTAAAGAT ATGATACTAT CATCGAACAA AATAATCCCT GAAAAAATCT 
    AATAACAAGC AACGCTAGTT CTTCAATCTG ACCTGATAGA TAATACCCCT 
    GATAGAAATT GGCATAGCAT GTGCAGGTAC GTGTGTGTTG GGCACTTAAC 
    GTTATTCCTT TGTCCAACAG ATGAGAACTA GATATTTAGA TAGTTAGCTG 
    CTGCCAAAAT TTCCAGGACT TTTGACATGG AAAAGTAAAT AGATTTAGAT 
    AGTTGGTTGC TGCCAAATTA TGCAGGATTT CTGCCATAGT AAAGTAAGTA 
    GCTTGAGACA ATTAGATATT CCAATCGAGC TCGTGAGATT AACTTTTGTT 
    GATAACTGAG ATCTTTCTAA ATACCATGCT AATTTATTTT GATTCCTTTC 
    TACTGCCTTA ACTCTTCATT ACTCCTGGCA AACTTTTACC TGTTGATTTG 
    CTGTTATGAC ACTTGGATGG GTGTTCTACT TATTCTGTAG GTTATGTTCG 
    GAAAATCACA TTTCGCCAGG ACATTGAAAA CATGGATGAG TTAGACAATG 
    GGAAACCACC ATAGTTTGAT GGCCCTGTTC GCTTGGCAGC TGTCATTTAT 
    TAACTGCTGC TGGATAGATT GTGTTCACAA CTTGGACGAT TTAACCAGTG 
    ATTCTTTCTG TTACAGTCAG GCACGGTACA TGATGAGGTG CCATTTTTAA 
    GTGTTGTAAA CCATTATCTG CTAATAATTG TACTCCTTTG TTCTTATCAT 
    TATAGTTGAT AAAGAAAAGG AAAGAAATTA TTTCAAGTCA GCTTTGGTTC 
    TGTTCT

    Gene models with high sequence identity

    1. AT3G19220.1 [+] show detail - protein disulfide isomerases
      E-value: 9e-21; Score: 99.80

     

    InterPro Scan Digest

    See the detailed result >

    AT3G19220.1

    Model type
    Protein coding
    Short Description
    protein disulfide isomerases
    Curator Summary
    Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.
    Computational Description
    SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR