K23109

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23109

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23109

Determination of introduced cDNA(s)

  • J023116C13 - Rice Full-length cDNAs - Original: J023116C13

    full reading [+] show sequence

    Nucleotide sequence: J023116C13 - full reading 
    TATCTTCCCC ACTCGTGCCT GGCTCTCTCT CTCTCCCTTT CTCCTCTCCT 
    CCAAGGTCAT GGCAAAGGAG AAATAACAGC TAGCGGGCTT GGGGAAGGGA 
    AAACAGCAAG TGGGAGATCG GCAGGGAGAG GTGAATTACT ACTTGAGTAG 
    AAGTGGTACA AGAAGAGTCG TCGTCTACCT GTGAGCGAAT TATTTCGAGG 
    TTGTGCGTTG CGATGATGGG AGGTGGTCTG GTGATGGACC AGGGCATGAT 
    GTTCCCCGGC GTGCACAACT TCGTGGATCT CCTGCAGCAG AACGGCGGCG 
    ACAAGAACCT CGGCTTCGGC GCGCTCGTGC CGCAGACGTC GTCGGGGGAG 
    CAGTGCGTGA TGGGGGAGGG CGACCTCGTG GACCCGCCGC CGGAGAGCTT 
    CCCGGACGCC GGTGAGGACG ACAGCGACGA CGACGTGGAG GACATCGAGG 
    AGCTGGAGCG CCGCATGTGG CGACCGCATG AAGCTGAAGC GGCTCAAGGA 
    GCTGCAGCTG AGCCGGGGCA AGGACCCCGC GGGCGGCGTC GTGGGCGACC 
    CGTCCAAGCC GCGGCAGTCG CAGGAGCAGG CGCGGCGGAA GAAGATGTCG 
    CGCGCGCAGG ACGGCATCCT CAAGTACATG CTCAAGATGA TGGAGGTGTG 
    CCGCGCGCAG GGGTTCGTGT ACGGGATCAT CCCGGAGAAG GGCAAGCCGG 
    TGAGCGGCGC CTCCGACAAC CTCCGCGGCT GGTGGAAGGA GAAGGTCCGC 
    TTCGACCGCA ACGGCCCCGC CGCCATCGCC AAGTACCAGG CCGACAACGC 
    CGTCCCGGGC TTCGAGAGCG AGCTCGCCTC CGGCACCGGG AGCCCGCACT 
    CGCTGCAGGA GCTGCAGGAC ACCACCCTCG GGTCGCTGCT CTCGGCGCTC 
    ATGCAGCACT GCGACCCTCC GCAGCGGCGG TACCCGCTCG AGAAGGGCGT 
    CCCTCCGCCG TGGTGGCCCA CCGGCGACGA GGAGTGGTGG CCGGAGCTCG 
    GCATCCCCAA GGACCAGGGC CCGCCTCCGT ACAAGAAGCC CCATGACCTC 
    AAGAAGGCCT GGAAGGTCAG CGTGCTCACC GCTGTCATCA AGCACATGTC 
    GCCGGACATC GAGAAGATCC GCCGGCTGGT CCGGCAGTCC AAGTGCCTCC 
    AGGACAAGAT GACCGCCAAG GAGATCTCCA CCTGGCTGGC CGTCGTCAAG 
    CAGGAAGAGG AGCTGTACCT GAAGCTGAAC CCCGGTGCCC GCCCTCCGGC 
    ACCTACCGGC GGCATCACCA GCGCCATATC GTTCAACGCC AGCTCAAGTG 
    AGTACGACGT CGACGTCGTC GACGACTGCA AGGGCGACGA GGCCGGCAAC 
    CAGAAGGCTG TTGTTGTCGC CGACCCGACC GCGTTCAACC TCGGCGCGGC 
    TATGCTGAAC GACAAGTTCC TCATGCCGGC GTCCATGAAG GAGGAGGCCA 
    CCGATGTCGA GTTCATCCAG AAGAGGAGCG CGTCTGGCGC GGAGCCTGAG 
    CTGATGCTGA ACAACCGTGT CTACACCTGC CACAATGTCC AGTGCCCGCA 
    TAGCGACTAT GGATACGGGT TCCTTGACCG GAACGCGCGC AACAGCCACC 
    AATACACTTG CAAGTACAAT GATCCACTCC AGCAGTTCTT CATCCGCGAC 
    GATACTCCAT TCGGTAACCA GATGGGCGAC ATCAATGGCG CATCGGAGTT 
    CAGGTTCGGC TCTGGTTTCA ACATGTCAGG TGCCGTCGAA TACCCCGGCG 
    CAATGCAGGG CCAGCAGAAG AATGACGGCT CGAATTGGTA CTACTGAGAG 
    TACTGAAGAA TAAACTTGTA GCGTTTAAAG AAAGAGCACC TTAAGCTTTT 
    AAAGTTCACC ATGGTCATCC CTCTGCTTCC ATGGTGGAAG CGTCTCCTGT 
    GAACCCGGTA ATTCTATAGG TCTTTCTCAT ATAGGTTTTG CATTAGTTGC 
    AAAATGGCTG GAACTTGGAA CTGGTTTATA CATGTATGTC CGTCCAGCCA 
    GTAAACCTCC TATGGAAACT TAATGTTATT TCTAGTTTAA TTTGTTAGTT 
    AAATGCTGTT CATATGTCTG GTTGTTAAGT CACCTGTGCT TGTTTGGGTA 
    TGTGGTTTGT ATCTTTATCA TCCGGTGAAT GTATGAAGTG CTCTCTTGAG 
    TAACTCTACG GCTCTACTTC TACCTGGTAA GCCTTCTACT GATGTTCATG 
    TTTTGCCTAT ACATGTTTCA TGTTTGATTG CTGCGGTACA TTTGGCCGTC 
    TTCCTCTATA GATGTCAATT TCCAGTTGGG GTTAAATATC AACCTAACCT 
    GTGGAAAATT TTCCTCCCGC TGTATCTTTC ATGCCTGGAA ATTTTGTCAA 
    GATGGTAACT AGACAGGTAT ACTTTTGTTT CTGCCAGTTC ATCAGAAGAA 
    ATGTTCAATT TACCTGGACT CCAATTCACT TCGATATTGA TGTTGCCACT 
    TTGCCAGTGG CACTAACCCA AGATCCCATC TCCATTCCCT CATTGGTGGT 
    AAAAAAGACG TATCCTGTTC GAGTTGCTTC TCTTGTTTCC CGTCAATGAT 
    CTCAATGTCT TTCACATCAA AGATGCTTGG AAAGCTAGGA TTTGATAGTC 
    TCAGCTTTTC GTAAAGCCGG GTCAATGCAA AGCTGCAACC CTAAGAAAAG 
    TTAGGCAGTC CAAAGCTAAG CTTCCCTTGA TGGCTTATCT TAAAAAGGGA 
    AGAAGATGAA TTTCGGATGG ATTGATGGAT GGTCCCTTGT TTG

    Gene models with high sequence identity

    1. AT3G20770.1 [+] show detail - Ethylene insensitive 3 family protein
      E-value: 4e-127; Score: 452.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Ethylene insensitive 3 3.8e-148
    Gene3D no description 1.8e-63

    See the detailed result >

    AT3G20770.1

    Model type
    Protein coding
    Short Description
    Ethylene insensitive 3 family protein
    Curator Summary
    Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.
    Computational Description
    ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR