K23236

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23236

Determination of introduced cDNA(s)

J013096K21 - Rice Full-length cDNAs - Original: J013096K21

full reading [+] show sequence

GGGGACTTAA CATTCCGGTT CTTCTTGCAG AAAGGAGGGG GCTCTGGATA 
TGCATCACCA GTCACAATTG GGTCAATGCT ATATGATGGG AACTCTTTGG 
TTGATTCAGA TCATTCCTAT CATATAATGA CAGAGACGAA TCATAGGTTA 
CTTAATGTCA GCTATGACAT TCACTATGTC GGGAATTGGT CGCTAGAAAC 
ATTTCGCCGT CAGCATATCT CTGCAGAGGG TGTTTATGAT GCTAAGACAG 
GCTCCTTGTG TATGATTGCT TGTCGGGTGG TTAATATCTC GTTGGACTGT 
GAAATTCTTG TAACTGCTCA GTTTTCTCCT TTGGATACAA AAGTAGCACA 
GCATGTCAAG GGGACAATTA GAAGCTTGAG GAAGAAGACT GACCCTCTTT 
TCTTTGAACC GCTGGACATT GCTTCGTATG GGTTGTACAT AGACAAAGTG 
GATGAGTCGA TGTGGAGAAT GGACTTGGAA AGCACCATGG CCCTGATCTC 
GATGACACTA TCCTGTTTGT TCATTGCTGT GCAACTGTTC CATGTCAAGA 
AGGTTCCTGA AGCGCTTCCT GCCATGTCAA TCACCATGCT TGTAGTTCTC 
TCTTTGGGTT ACATGATACC TCTTGTGTTG AACTTTGAGG CCCTCTTCAA 
GAACAGTAAC AAACAGACAT TTCCACTTTC AGGTGGTGGT TGGCTTGAGG 
TGAATGAAGT CATTGTGCGA ATCATTACCA TGGTAACCTT TCTGATGCAG 
TTACGACTTC TTCAATTGGC ATGCTCTGCA CGTTCCATGG ATGTAAGCAA 
AGATCAATCA TGGGCTGCTG AGAAGAAAGT GCTTTGGATA TGCTTGCCAC 
TGTACATTAT AGGTGCAGTC GCAGCTTGGG TTGTTCACAT GCAATTTAAC 
AACAACCGAA GGATGCTTAG AAAGGTTGCT CGCTTACCTC GGGTTAATAG 
ACATGCATTC TGGGAGGACC TTGTGTCATA TGGGGGATTA ATACTCGACG 
GGTTCTTGCT CCCTCAGGTT ATCTTAAACG CATGCTTAGG CTCCAAAGTG 
AAGGCACTTT CCCCGGGATT TTACATTGGA AGCACCATGA TTCGTGCGCT 
ACCTCATGTG TATGATGTGT TCAGGGCTAA GCATTTTGTG CCCAGCTTGA 
GACCATTTTA CAGGTATGCA AACCCTCGCG ATGATCTCTT CAGCCTTGCA 
TGGGACATTG CCATACCATG TGGAGCAATA CTGCTGTCGG TTCTTCTGTT 
CCTTCAGCAG CGGTTTGGAG GCGCTTTCTT CATTTGTTCG AAGAACAGGA 
AGGCAAGTGA ATATGAAATG GTTTCCACAG TTAGCTCTTA ACAAGTTTTC 
ATCTGTGCAA GAGAAATATA GAGAAGGTTT CTATAGGCTA AGAAATAGGT 
TGCTTCTTAT GTCTATGTTT GCTTTACACA CTTACATACC TGCCTTGTTG 
AAGCAAAATT ACATACAAAA GAAGCTATTC AGGTTGGGCA TTCAGC

Gene models with high sequence identity

AT4G21700.1 [+] show detail - Protein of unknown function (DUF2921)
E-value: 2e-91; Score: 333.00

InterPro Scan Digest

See the detailed result >

AT4G21700.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF2921)
Computational Description: Protein of unknown function (DUF2921); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT1G52780.1); Has 127 Blast hits to 111 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR