K23340

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23340

Determination of introduced cDNA(s)

J033044O22 - Rice Full-length cDNAs - Original: J033044O22

full reading [+] show sequence

GAAACTCCTC CAATGGCGAC CGCGCGCGTC TCCCTCATCC TCCTCGTCGT 
CGTCCTCGCC GCCTCCGCCT GCGCGGAGGG GCTCCGGCTG CCCCGCGACG 
CCAAGTTCCC CGCGGCGCAG GCCGAGCGGC TCATCCGCTC GCTCAACCTG 
CTGCCCAAGG AGGCCGGGCC AACCGGCGCC GGGGATGTCC CCAGCGTGGC 
GCCCGGCGAG CTGCTTGAGC GGCGGGTCAC GCTGCCCGAG CTCCCCCAGG 
GGGTCGGCGA CCTCGGCCAC CACGCCGGCT ACTACCGCCT CCCCAACACG 
CACGACGCGA GGATGTTCTA CTTCTTGTTC GAATCGAGGG GGAAGAAGGA 
GGATCCCGTC GTGATCTGGC TCACCGGAGG CCCCGGATGC AGCAGCGAGC 
TGGCCGTCTT CTACGAGAAT GGCCCGTTCA CCATCTCGAA CAACATGTCG 
CTTGCTTGGA ACAAATTCGG CTGGGACACG ATTTCAAATA TAATTTTTGT 
TGATCAACCC ACTGGAACTG GATTTAGCTA TAGCTCTGAT GATCGTGATA 
CTCGTCATGA TGAGACAGGC GTCAGCAATG ACCTATATAG CTTTCTTCAG 
GTGTTCTTTA AGAAGCATCC AGAGTTTGCA AAGAATGACT TCTTTATAAC 
CGGAGAATCT TATGCTGGGC ACTACATTCC AGCATTCGCA AGCCGGGTTC 
ACCAAGGAAA CAAAGCAAAC GAGGGCATTC ACATAAACTT GAAGGGTTTT 
GCGATCGGTA ATGGCCTCAC GGATCCAGCA ATCCAGTACA AAGCTTACAC 
CGATTATGCA TTGGACATGA ACCTTATTAA AAAATCAGAT TACGACAGGA 
TCAACAAGTT CATCCCACCA TGTGAATTTG CAATAAAGCT TTGTGGTACC 
AATGGGAAAG CATCTTGCAT GGCAGCATAC ATGGTCTGCA ATTCTATTTT 
CAGCTCCATC ATGAAGCTTG TTGGGACAAA GAATTACTAT GACGTTAGGA 
AGGAATGCGA AGGGAAACTT TGCTATGATT TCTCAAACTT GGAGAAGTTT 
TTTGGAGATA AAGCAGTCAA AGAAGCAATT GGAGTTGGCG ACCTTGAATT 
TGTCTCATGC AGCACTACTG TTTATCAAGC AATGCTGACA GACTGGATGA 
GAAACTTGGA AGTTGGCATC CCAGCTCTAC TTGAGGATGG GATCAATGTG 
CTTATATATG CTGGAGAGTA TGATCTTATA TGCAATTGGC TTGGAAACTC 
GAGGTGGGTC CACTCGATGG AATGGTCTGG CCAGAAAGAC TTTGTATCAT 
CTCATGAATC GCCATTTGTA GTAGATGGTG CCGAAGCTGG TGTTTTGAAG 
AGCCACGGGC CACTCAGCTT CCTCAAGGTC CACAATGCTG GTCACATGGT 
TCCAATGGAC CAACCCAAAG CTTCCCTGGA AATGCTGAGG AGATTTACTC 
AAGGGAAACT CAAGGAGGAA TGGCTTGCCG AGCTTCCTGA GCAACCGATG 
TATGCTGCGA TGTGATAAAA ATACAACTGA AATAGTCTAA TAGGTAGTTT 
GAGTTGCCGT TTCACGGAGT GCCTGAAGCT TCATGTTTCC TTTTTTACCC 
TCTTTCTTTT TCCCAATGTA TCAACTGAAT GCATAATTCT GAAAATAACG 
TTGGAACCGC GATGTAACTA AAGTTCCACT CATGTACACT GCAAATGAAA 
AATCAAATAC ATGGAGGGGA AATGTTTCAA AGGCCG

Gene models with high sequence identity

AT3G10410.1 [+] show detail - SERINE CARBOXYPEPTIDASE-LIKE 49
E-value: 0; Score: 661.00

InterPro Scan Digest

Program	Description	E-value
superfamily	alpha/beta-Hydrolases	4.7e-137
FPrintScan	Peptidase S10, serine carboxypeptidase	6.3e-27
FPrintScan	Peptidase S10, serine carboxypeptidase	6.3e-27
FPrintScan	Peptidase S10, serine carboxypeptidase	6.3e-27
FPrintScan	Peptidase S10, serine carboxypeptidase	6.3e-27
Gene3D	no description	6.2e-135
PatternScan	Peptidase S10, serine carboxypeptidase, active site	0
PatternScan	Peptidase S10, serine carboxypeptidase, active site	0
HMMPfam	Peptidase S10, serine carboxypeptidase	9.2e-127
HMMPanther	SERINE CARBOXYPEPTIDASE CPVL/CARBOXYPEPTIDASE	1.1e-211
HMMPanther	Peptidase S10, serine carboxypeptidase	1.1e-211

See the detailed result >

AT3G10410.1

Model type: Protein coding
Short Description: SERINE CARBOXYPEPTIDASE-LIKE 49
Computational Description: SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink).
Link: InterPro Scan - TAIR