K23426

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23426

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23426

Determination of introduced cDNA(s)

  • J023058D05 - Rice Full-length cDNAs - Original: J023058D05

    full reading [+] show sequence

    Nucleotide sequence: J023058D05 - full reading
    TGGGAGAGAA GAAGAAGAAG AAGAAGAATC CATGGCGGCC ACGAGCTCGG 
    AGAAGAAGAC GGCGGCGGAG GTCGTCGCCA TGCTGGATCT GCAGCGCCAC
    CCCGATGGCG GGTTCATCCT GGAGACCTTC CGCGACCCCT CCATCTCCCT
    CCCCAAGTCC GCCCTCCCTC CCCGCTGTAA GCTTGGCCAT TTTCATCGGG
    TTGCTTGATC TCGCGTTGGA TTGTGGATTG CTTCAATTAG AGGTCATTTC
    CACTTACAGA TAGCTGTAAT CGATGATTTC GGGTCCGGAT ACTGTGCTGA
    TTATTGCGAT TGGAGATATA TTATAATGTA GTTCAGAAAT CAGTGTGAGT
    TCATGATTCT ACGGCAATAT GCTCGTCAAG ATCATCCTAG TTGTTTAATT
    GTTGTGTCTT TTGATCCTAC TTTTTTGAAA TAAACTGGAG TAATTATAAT
    CTACTGAAGA CACAGAAAAA GAAAAGGACT GTTTTCTTTG GGCACGAAAT
    TCTGGTAATT AAAAAGTATT AGTAGAATCT GAGGCAGTAG GTGTTCTACA
    CTCAGAGAGT CAAGGTTCCC CAAACTAGTC AAGAAGTGCA AACTATTGTT
    ATTTCCTGGC AGTTTTCTTT TGTGTAGAAA ATTCCTAAAT AATGAAGTCT
    GACTTCTTAT ACTTTTTAGC AAAATCCAGG GGTATTTGGC ATTATATGGC
    TCATTCTATG TGTTAGTACA ATAATAACAG TAAGAACAAC ATGAATGAGA
    TTCGAATTCT GTGTATATCC TGCCTACACT GGATTGTTAT AATCGATCAG
    ATTTTGTAGC TCCTAAACTA GATGATTTAA TTTCTGATAA AAAAGCTTCA
    TGAGTTAATA AAGGGTCAAA CATTAGTACT CCAAACATTA CTGCTAGGTT
    CTGAGCTTGC GGCCAGATGT ATGTTCTGGA TCGTGTATAC TCTGGAGTCT
    TGACATGTCT ACTAACTGTC CATCAATAAA CTTGTGATGA GATAATAATT
    TCTCGCGCTC CTTGACTGCT TCCTTTCTCT TGTAAAGTAA ATGTTAGCTC
    TTGTAACTAA GCGTATTTGA CTGCTGATGC GTGCAATTTT TGACTTGGCA
    AAATTGGCCT AGCTGCATTT TTTCCCCCTG ACCAAGGGGC AACTATCGCT
    GTCTCTCCTT TTGTGAAGGA TACACAGCAA GAGTCTGGTC AGTAGTATAT
    CCTGGTTTTT ACATCTAGGA AGACTCAAAA AAGGGCATAT CTGTAACTCA
    CAGGCCATAG GAGTATTTGT TCAGAAGTAT TATCAACATG ACTTTGATTT
    GTCGTTACTT TTACATCATT ATATTTGATT AGTGCAAATT TGGTCCTTTG
    ATGCTATACA CAACTCTTTC TCTTGCTAAC TGTGCTTAGT CAATATTGGG
    TGCTGAGTCT TTAACTTCTC ATTTATCCTA AAAAAAACAC TTCTAAATTT
    GGGGTTTTCA CATATCAGAT TAGCACACCA TTGAGCATGA GCCTGACAAA
    CTTCATTTAC TGTAACACAC AGACCAGAGA TGGTTCATAA TTAACAGACT
    CAGTCCCATG ATAGTATAAA ATATCTTAGA GCATATTCTT TTTTTCTTTC
    TTTTGAATTG CAGGCAAAAG CTTTGACCAC TTTTAGAGGT TATTCATCAA
    TGCATTGTGT GGTGCCGCCC ACTGTTAACT CCCTAGTTAA CCGTCATAAG
    AGTAGAGTCT GCTTAACATT TTAGATTACC ACATAATGTT AACTCCAATT
    TCAGTTCCTG TGAGCTACTA TAGATTTATA AATAAAAATA ACACATTATC
    TCTAATTCTG TCAATGTGTT TCATTCCTTG TAGATAAGGT AGACCGTGCT
    GTGAGCAATG CCATATATTT CCTGCTACCT GCTGGAGAGA TCGTTAAGTT
    GCATCGCATC CCTTGTGCTG AGACCTGGCA CTACTACATG GGGGAACCTC
    TCACGGTCAG CAAATTTTAA CATAAATATC AAATTAACAT AACTTCTTGA
    CTAACCCCAT TTTTTTTCAG GTATTTGAAG TGCATGACGA TGGACAATTC
    AAGATGACAG TTGTTGGACC TGATCTACGG CATGGCCAAA AGCCACAATA
    CACAGTTCCT CCAAATGTTT GGTTTGGCGC CTTCTTGACC TGCGACATCG
    AGTCCTTCAC CGAAGATGGA AGTGTGTTTG TCAAAACGCC TGGAAGAGAC
    TCTGAGCTGC ACTACTCTTT CGTCGGTGTA ACCTGTGCTC CAGCATTCCA
    GATTGAAGAC GACGAAATGG CAACACGGGA GAGCATGAAA GCTTTGGCTC
    CTAAAGCAGA AGCTTTCATC AACTACCTTG TGCCTTCAGA CTGAGTTTTA
    TTCCACTCCA AGTAGCTCGC TCTACGTAAT GAACTGTATG TACCAAGCTA
    CTGATGTTTG CAGGGCAGAA ACCCTGAGGC CTGAAGCTTG CATGTATCAT
    CACTGACCAG TTAGTAGTAT TTAGTATTGG TTTGGTGACA TAGTTTCTCA
    CTATTTTTTC GG

    Gene models with high sequence identity

    1. AT1G19130.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like je...
      E-value: 5e-25; Score: 113.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF985 3e-11
    Gene3D RmlC-like jelly roll fold 4.99999811956429e-06
    Gene3D RmlC-like jelly roll fold 7.6e-14
    HMMPfam Protein of unknown function DUF985 2.1e-12

    See the detailed result >

    AT1G19130.1

    Model type
    Protein coding
    Computational Description
    CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR