K23430

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23430

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23430

Determination of introduced cDNA(s)

  • J033102B03 - Rice Full-length cDNAs - Original: J033102B03

    full reading [+] show sequence

    Nucleotide sequence: J033102B03 - full reading
    GACAGTTTTT CAGGCTTCTG AACTTGCTCA GCTAGCCACT CTGCTCCAAC 
    GCACGCAGCT TAGCTCGGAG TGACAACGGA ATGGCTACCA TGGATGAGCA
    GCAGCCACTG CACATCCTCT TCCTCCCGTT CCTCGTGCCC GGCCACCTCA
    TCCCGATCGC CGACATGGCC GCGCTCTTCG CGGCACGCGG CGTCAGGTGC
    ACCATCCTCA CCACCCCCGT CAATGCCGCC GTCGTCCGCC CTGCCGTGGA
    CCGCGCCAAC GACGACGCTC TCCGTGGCGA TGCCGGCGGC GCACCGGCGA
    TCGACATCGC CGTCGTGCCA TTCCCGGACG TCGGGCTCCC GCCGGGCGTC
    GAGAGCGGCA CGGCGCTTGC TTCCGAGGAG GACCGTGGCA AGTTCGTCCA
    TGCCATCCAG CGGCTGCGCG AGCCGTTCGA CCGGTTCATG GCGGAGCACC
    ACCCCGACGC CGTCGTGGCC GACGGCTTCT TCACTTGGTC CGTGGACGCC
    GCCGCCGAGC ACGGCGTCCC GCGGCTGGTG TTCCTCGGCA CCGGCGTGTT
    CGCGCGGTCA TGCCAGGAGA GCATGGTGCG CCACAACCCG GTGGAGGCCT
    GCCCCGACGA CGACCCCGAC GCCGCCGTGT CCCTGCCGGG GCTGCCGCAC
    CGCGTCGAGA TGAGGCGGAG CCAAATGATC GACCCAAAGA AACGGCCGGA
    CCACTGGGCC TACTTCAAGA TGATGAACGA CGCCGACCAG AGGAGCTATG
    GCGAGGTGTT CAACAGCTTC CACGAGCTGG AGACGGACTA CGTCGAGCAC
    TACCGCACGG CTCTCGGCCG CCGCGCGTGG CTCGTCGGGC CGGCGGCGTT
    CGCGAGCAAG GACTTCGCGG CGAGAGGCGC CGCCGAGCTC TCGCCCGACG
    CGGACGGCTG CCTGCGGTGG CTCGACGCGA AGCCACACGG CTCCGTGGCG
    TACGTCTCCT TCGGCACGCT GTCCAGCTTC TCGCCGGCGG AGATGCGCGA
    GCTCGCCCGA GGCCTCGACC TCTCCGGCAT GAACTTCGTG TGGGTCATCA
    ACGGCGCCGC GGACGACACC GACGCGTCGG GTCAGTGGAT GCCCGAAGGC
    TTCCCCGAGC TGATCTCGCC GCACGGCGAT CGCGGCCTCA CCATCCGTGG
    GTGGGCGCCG CAGATGCTGA TCCTGAACCA CCCCGCCGTC GGCGGGTTCG
    TGACGCACTG CGGGTGGAAC TCGACGCTGG AGGCCGTGAG CGCCGGCGTC
    CCAATGGTGA CCTGGCCGCG GTACGCCGAC CAGTTCTTCA ACGAGAAGCT
    CATCGTGGAG GTTCTCAAGG TCGGGGTCAG CATGGGGTCC AAGGACTTCG
    CATCGAATCT GGAGAACCAC CAGGTGATCG GCGGCGAGGT GATCGCCGGA
    GCTGTCAGGA GGGTGATGGG TGACGGTGAA GAGGGCGCCG AGGCGATACG
    GAAGAAGGCA GCGGAGCTAG GCGTTAAGGC GAGGGGCGCC CTGGAGAAGG
    GCGGTTCGTC GCACGACGAC GTTGGACGGC TGATGGACGC GTTGATGGCA
    CGCCGGACCT CTGTTGACGT ATGAGGTGGC GGTTGACGTG AGGAACGCCG
    TCGGATGGTG ACCGGACAGC ACACGCGTTG TAAAATTCTG GTTATACATA
    TACATGAGTA TAACGTTGAG CGGCC

    Gene models with high sequence identity

    1. AT2G15480.2 [+] show detail - UDP-glucosyl transferase 73B5
      E-value: 4e-96; Score: 349.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 5.4e-58
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 2.5e-23
    Gene3D no description 8.8e-16
    HMMPanther UDP-GLUCOSYLTRANSFERASE 7.3e-116
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 7.3e-116
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0

    See the detailed result >

    AT2G15480.2

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 73B5
    Computational Description
    UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3).
    Link
    InterPro Scan - TAIR