K23549

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23549

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)
  • low saturation (PATO:0000328)
    (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23549

Determination of introduced cDNA(s)

  • J013147K07 - Rice Full-length cDNAs - Original: J013147K07

    full reading [+] show sequence

    Nucleotide sequence: J013147K07 - full reading
    TGAGCGATTT GTTTAGATCA AACGGGTTCG TAAAAAAAAA GTTTTATTCT 
    CGGGTTCGTT GGGTTTTATC TATATAGGCG GCGAGCGAGA CCATCTCATT
    CAGTTTTATT CCGCGCGCCT CCTAAATCGC GCTTAATCCG GCGCATCCTG
    ATTCAGAGAG TGGTTTGGAT TCGTTGGATT CGAGGTGAAC GAACAGGGCG
    TGGAATTTTC GAGGACTCTC TCCTCTCGCA GAATCCCGCG CGCCTCCTGA
    TTCGGAGAGC GGTTTGGATT TGGATTCGAG GCGAGGAATT TTCGAGGACT
    TTGGCAGCGG CGGCGGGGGC TGGTGAGCTT CTGCTGCGGC TTGGAGTCTG
    CCCCCACCAT TGCGTGGGGA GGTGGAGGTG GAGGCGGTGG TGGCGGCGGG
    GGCGGCGGAG GACGATCCTT CCGCGGCTTC GGTGGCAGGT TTGATCCAAA
    TTGAGCGCCC TGAGGATTTG GGGCGTGTTT ATGGAGGATT AGATCGAGAA
    TTTTGGTTGT TTCTGTGAGA TGGCCGCCGA TTCCAGCATG GGATTCCATC
    AGGGGATCAC GGCCTCGATG TACAACCATC ACATGCTCTC CTTCCAATCT
    AACAGCGACT TGGGCGGTGG CGCCGGCGCT GCGGCCGGTA TGGTGATGGC
    CCCGAGGAGC ATGAACGGGA CTAGTAGCAG CGCTGGGCTG TTCGTCTCTC
    CGAACACCGG TGTGCTGGGC AACGCATCGG TGGCCGGCCC GTCGAGGAGC
    TCGTCGGGGG ATGCGTTCAG TAGCACGGTG GCGCCCAAGT ACAAGTTCGT
    CACTGGTTCG CCTTCAGATT GGAATGACCG TGAGCTGAAC ACACTGAAGG
    AAGGGCTTGT GAGATATGCT CGCGAACCGA ATATCATGAA GTACATAAAA
    ATAGCAGCTA TGCTACCCAA CAGGACTGTC AGGGATGTTG CATTGCGGTG
    TTGGTGGGCT ACAAGTAAAG ATAGAAGGAA GAAACCTGAT GGATTTTATA
    CAGGGAAAAA GATAAGAGAC ATGAAGCCAA TCCAGGACAA GATGGTTGCA
    TCTGCCTCCA TGGCTAATTT TCACCTGGCA CCTGCAAACA CTGTGACCCC
    TTTCTCAATA TCGATGCAAC ATACAAATCA GCAATGTCAG GTTCCTAAGG
    AAGAAGTTCC TGTCGTGGAT AGTGCAACAC AGCATCTCCT GGAAGAAAAC
    AATCATTTAC TCAACCAAAT CGCCACAAAT ATCGAAACAT TCAAGACGGG
    AGAGAACACG GATCTCTTTT TTCGGACAAA CAACAACTTC AAAAATATTT
    TAAGCAGAAT GAGCGAGACG CCTGGTATCA TGGGCCAGAT GCCCCAATTG
    CCAGTGCAAG TAAACGAAGA CCATCTGAGT TCACTTCTTC AGCTGGACAG
    AATGGTTCCT TCGTATGGCG TAACGCAAAC CTCTCATATG AAGCAAGAAC
    CGCGAAGCTA GTATAAACAT ACACGAAAAC AAGGACTTGA AAAGGAAAAA
    AAAGAGCAGA TGGCTGGAGC TCCGCCGCCC AAGTTTCGTG TACCATGAAG
    AAGGCTAAGT TGCCGCACCG AGTGAGCGAG CGCCAGGAAC AGTCCCGGCG
    TTTCTTTCTT CCAGCGAGAT TGTTTTCCAG TGATCTGATT GTCTGCCCGC
    CTGCCTACCT GCCCGAGTTG AAAGCTGTTG AAAGCACCGG AAATTGAGGC
    CTGCAGCTGC TTGCGGGGGT ATGCGCAACG GGCGAGCGAG TTGCTGTTGT
    TGTACCTGGT TGGGTATCCA GCGAAATGAA TACACCAGAC ACTTGATTCG
    GGAGTGAGTA ACACGCACAC AAGTGACTGT AAATATTTGG ATGGCTGGAG
    GTGTTCCCCT GTCCTGTTTT GTTCTCTCTG ATTGGTCGTC AATATATTTT
    TCGGAAGGGT ACCTTGTATG TTTTTCCACT TTGGAGAGTT AGGAGGGCAC
    CTTATGTATT ATTGCATAGT TGGAAGATCG TGTTGATAAA ACCAACAAAA
    AGATGGCTTT AGGTTTTG

    Gene models with high sequence identity

    1. AT1G10820.2 [+] show detail - Protein of unknown function (DUF3755)
      E-value: 4e-30; Score: 130.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G10820.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3755)
    Computational Description
    Protein of unknown function (DUF3755); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G60670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR