K23633

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23633

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23633

Determination of introduced cDNA(s)

  • J033087I04 - Rice Full-length cDNAs - Original: J033087I04

    full reading [+] show sequence

    Nucleotide sequence: J033087I04 - full reading
    GGTCCCCGGC CCGGCCCGTG CCTCCCCCAG TCCTCCTCTC CCCCGTCTCC 
    CGCCGCCTAG CGATTCCCGG AGCGCCTCCT CCGCCACCCA TCCTGCTCCA
    ATGGCGCTTC CTTACCTGGA GGCCGTGCTG TGCTTTATGA TTCTCATGTA
    TATATTTGAG ACATATCTTG ACATCCGTCA GCATAGAGCC CTTAAGTTGC
    CAACACTGCC AAAACCCCTG GTAGGAGTAA TTAGTGGTGA AAAGTTTGAG
    CGCTCCAGAG CTTATAGCCT TGATAAAAGC AAATTCCATT TTATCCATGA
    AGCTGTAACT ATATTAATGG ATACCACAAT TCTGTACTAT AGAGTTCTTC
    CCTGGGTTTG GAAGAAATCT GGAGAGCTAG CAACCAATGC TGGCCTAAAT
    GCTGAAAATG AGATACTACA CACTCTTGCA TTCTTAGCAG GTGTCATGAT
    TTGGTCACAG ATCACAGACT TACCATTCTC TCTTTATTCA ACATTTGTTA
    TTGAAGCTAA ACATGGTTTT AACAAGCAAA CTATTTGGCT CTTCATTAGG
    GACATGGTCA AAGGGATTTT GCTATCGATC TTACTTGGAC CTCCTATTGT
    GGCTGCTATT ATCATCATAG TACAGAATGG AGGGCCCTAC CTGGCAATAT
    ATCTATGGGG TTTTATGTTT GCATTATCTC TTGTGATGAT GGCAATATAC
    CCCATCGTGA TAGCACCTCT GTTCAACAAA TTCACTCCGC TTCCAGAAGG
    AGTACTCAGA GAGAAAATAG AGAAATTAGC AGCTTCACTC AGTTTTCCAT
    TGAAAAAGCT TTTCGTGGTG GATGGGTCTA CCAGATCAAG CCACAGTAAT
    GCTTACATGT ATGGGTTTTT CAAGAACAAG CGCATTGTTC TCTATGACAC
    GTTGATTCAG CAGTGTAGTA GTGAGGATGA AATAGTTTCT GTTATTGCAC
    ATGAACTTGG GCACTGGAAA CTCAACCACA CTGTGTATTC CTTTGTAGCT
    GTCCAGCTCC TTATGTTCCT ACAATTTGGA GGATATACGC TAGTAAGGAA
    CTCCAAAGAC CTTTTTGAAA GTTTTGGTTT CGAGGATCAG CCTGTAATAA
    TTGGGCTGAT CATATTTCAG CACACTATAA TACCTGTCCA GCACCTTCTG
    AGTTTTTGTC TGAACCTTGT CAGTCGGGCA TTTGAATTTC AGGCTGATGC
    TTTTGCCAAG AACCTTGGGT ATGCTCCTCA GCTCCGTGCA GCCCTTGTTA
    AACTACAGGA AGAGAACTTA TCTGCAATGA ACACAGATCC GTGGTATTCA
    GCCTACCACT ACTCCCATCC ACCCCTTGTT GAAAGGCTCT CTGCTCTTGA
    AGACGCAGAC AGCAAAAAGG AAAACTAACG GAAAGTTGAT CCACCTGAAA
    CACCGAAGTC TTTACTCTTC CATGGGTTAC CTTACGGTGT CATGGAATCG
    TTTCAATGTT CGGGATGTTA ATGGAATGTG TGAGTACATG AGAAGTACTG
    TAAGCGTTCA AACATTTATC ATACAGGGGA ACGTTGGCAA CTATGTAGCT
    CTCGATTAAG ATAGTTTGCC TTCCATTAAT TGGCTTACAG ATATTGACAT
    ATACTCCTTC CATTTCACAA TGTAAGTTAT TCTAGCATTT TCCACATTCA
    TATTGATGTA TTAATATGAA TGTGGGAAAT GCTAGAATGA CTTGCATTGT
    AAAACGGAGG AAGTACATGT CAGTGTATTC TCCTACTACT TTCGACAAGA
    AATAGAAGTG AATCAGCT

    Gene models with high sequence identity

    1. AT4G01320.1 [+] show detail - Peptidase family M48 family protein
      E-value: 0; Score: 664.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther CAAX PRENYL PROTEASE STE24 4.1e-211
    HMMPanther CAAX PRENYL PROTEASE STE24 4.1e-211
    HMMPfam Peptidase M48 1.8e-59

    See the detailed result >

    AT4G01320.1

    Model type
    Protein coding
    Short Description
    Peptidase family M48 family protein
    Curator Summary
    CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.
    Computational Description
    ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR