K23811

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23811

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23811

Determination of introduced cDNA(s)

  • J033102B03 - Rice Full-length cDNAs - Original: J033102B03

    full reading [+] show sequence

    Nucleotide sequence: J033102B03 - full reading 
    GACAGTTTTT CAGGCTTCTG AACTTGCTCA GCTAGCCACT CTGCTCCAAC 
    GCACGCAGCT TAGCTCGGAG TGACAACGGA ATGGCTACCA TGGATGAGCA 
    GCAGCCACTG CACATCCTCT TCCTCCCGTT CCTCGTGCCC GGCCACCTCA 
    TCCCGATCGC CGACATGGCC GCGCTCTTCG CGGCACGCGG CGTCAGGTGC 
    ACCATCCTCA CCACCCCCGT CAATGCCGCC GTCGTCCGCC CTGCCGTGGA 
    CCGCGCCAAC GACGACGCTC TCCGTGGCGA TGCCGGCGGC GCACCGGCGA 
    TCGACATCGC CGTCGTGCCA TTCCCGGACG TCGGGCTCCC GCCGGGCGTC 
    GAGAGCGGCA CGGCGCTTGC TTCCGAGGAG GACCGTGGCA AGTTCGTCCA 
    TGCCATCCAG CGGCTGCGCG AGCCGTTCGA CCGGTTCATG GCGGAGCACC 
    ACCCCGACGC CGTCGTGGCC GACGGCTTCT TCACTTGGTC CGTGGACGCC 
    GCCGCCGAGC ACGGCGTCCC GCGGCTGGTG TTCCTCGGCA CCGGCGTGTT 
    CGCGCGGTCA TGCCAGGAGA GCATGGTGCG CCACAACCCG GTGGAGGCCT 
    GCCCCGACGA CGACCCCGAC GCCGCCGTGT CCCTGCCGGG GCTGCCGCAC 
    CGCGTCGAGA TGAGGCGGAG CCAAATGATC GACCCAAAGA AACGGCCGGA 
    CCACTGGGCC TACTTCAAGA TGATGAACGA CGCCGACCAG AGGAGCTATG 
    GCGAGGTGTT CAACAGCTTC CACGAGCTGG AGACGGACTA CGTCGAGCAC 
    TACCGCACGG CTCTCGGCCG CCGCGCGTGG CTCGTCGGGC CGGCGGCGTT 
    CGCGAGCAAG GACTTCGCGG CGAGAGGCGC CGCCGAGCTC TCGCCCGACG 
    CGGACGGCTG CCTGCGGTGG CTCGACGCGA AGCCACACGG CTCCGTGGCG 
    TACGTCTCCT TCGGCACGCT GTCCAGCTTC TCGCCGGCGG AGATGCGCGA 
    GCTCGCCCGA GGCCTCGACC TCTCCGGCAT GAACTTCGTG TGGGTCATCA 
    ACGGCGCCGC GGACGACACC GACGCGTCGG GTCAGTGGAT GCCCGAAGGC 
    TTCCCCGAGC TGATCTCGCC GCACGGCGAT CGCGGCCTCA CCATCCGTGG 
    GTGGGCGCCG CAGATGCTGA TCCTGAACCA CCCCGCCGTC GGCGGGTTCG 
    TGACGCACTG CGGGTGGAAC TCGACGCTGG AGGCCGTGAG CGCCGGCGTC 
    CCAATGGTGA CCTGGCCGCG GTACGCCGAC CAGTTCTTCA ACGAGAAGCT 
    CATCGTGGAG GTTCTCAAGG TCGGGGTCAG CATGGGGTCC AAGGACTTCG 
    CATCGAATCT GGAGAACCAC CAGGTGATCG GCGGCGAGGT GATCGCCGGA 
    GCTGTCAGGA GGGTGATGGG TGACGGTGAA GAGGGCGCCG AGGCGATACG 
    GAAGAAGGCA GCGGAGCTAG GCGTTAAGGC GAGGGGCGCC CTGGAGAAGG 
    GCGGTTCGTC GCACGACGAC GTTGGACGGC TGATGGACGC GTTGATGGCA 
    CGCCGGACCT CTGTTGACGT ATGAGGTGGC GGTTGACGTG AGGAACGCCG 
    TCGGATGGTG ACCGGACAGC ACACGCGTTG TAAAATTCTG GTTATACATA 
    TACATGAGTA TAACGTTGAG CGGCC

    Gene models with high sequence identity

    1. AT2G15480.2 [+] show detail - UDP-glucosyl transferase 73B5
      E-value: 4e-96; Score: 349.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 5.4e-58
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 2.5e-23
    Gene3D no description 8.8e-16
    HMMPanther UDP-GLUCOSYLTRANSFERASE 7.3e-116
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 7.3e-116
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0

    See the detailed result >

    AT2G15480.2

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 73B5
    Computational Description
    UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3).
    Link
    InterPro Scan - TAIR