K23823

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23823

Determination of introduced cDNA(s)

J033150B10 - Rice Full-length cDNAs - Original: J033150B10

full reading [+] show sequence

GATTGGCACT GTACCGCTCG ACATGAACGG CGAGGAGGCT CCGGCCGGGA 
GCGGCGGCGG CGGCGGTGGA AGGGCGGAGA TCGACACGTC GGCGCCCTTC 
GAGTCGGTGC GCGAAGCCGT CGACCACTTC GGCGGCGGCG CCGCCGCCGT 
CTGGAGCTCC TGCCTCGTCA ACCGCATGCT CACTCCCCCG AAGGAACATG 
ACCAGATGAA TGGGCAGACC TTGCAGCTAG AGAAGGAGCT CATCATCAAG 
GAAAGCCAGA CGCTTGATGT GCCCAAAGAA TTAGAGTCCT CCAAAAGGAT 
CATTTCGGAC TTGAAGCTAA AAGTGCAGAA TGATTCAGCC ATCACTGGAC 
ACCCGGGCCA AACTGAAGCA CCAGGTGCAG GGCCTGAGGA GAGGCGCTCT 
TCTGAAAATG TTGAAACTGA TGGGGAATTG GGTGGCCTGG ATTCACAGAA 
TCTGCAGCCT CCAAGTTCAG TGCTAATGCA GCTTGAGCAG GCAAAAGCGT 
ACTTGACCAG AACCACAGCT GATCTAGCCG AGATAAGAGC CTCCGTTGAG 
TCGCTGTGCA ATGAGATAGC AAAAGAGAAA ATCTTGGTGG AGAGAAGTCG 
AGAGAAGGTT TGCTCCAACA CATCCTTGAT CTCTTCGCTG GAGGGTGAAT 
TGGATCGCAC TACACATAAG CTGCAAACGC TGAATGATAG GCAAAGAAGG 
CGCGAGGATT CGTCACACAT TCTGATGGAG ATCAAGAAGG TGACATCAGA 
GATAGAGCAG CTCAAGAGCG CATCAAATGC ATCGAAATCT GAAGCTACGA 
TGTTGGCTGC CGAAATTGAG CAGACAAAGG CAAGCATTGC AACCGCTGAG 
GTGAGGTGTC TTGCAGCCAA GAAGATGGAA GATGCAGCAA GAGCAGCAGA 
AGCTCTTGCA CTTGCTGAGA TCAAGGCCCT ACTTAGCGGT GAAGCTTCAG 
CTGGAGATCT CCAGGGTACT GATGGAGTGA ACTTGTCCTT GGAAAAGTAT 
TTTGAGCTTG CTTCAAAAGC TCAAGAGTGT GACGTCAGCT CGAGGAAGAA 
GATTGAAGCG GCAATGTTGC AGGTGGAAGA AGCCAACCGA TCAAAATCCA 
ACTCGCTCAA CAAGCTGGAG GAAGCTAAAT TGGAATTTGA GAAATGCAAA 
ATTGCACTGC AGGATGCTCT GAAGAGGGCA CACGCTGCCA ATCGGGGGAA 
GCTCGCAGTG GAAGAGTCTG TTCGTAGATG GCTATCTGAG AGTGGCTACA 
AGAGGCACTC ATTTCATGAT TCTTCCAAGT TAAAAAATGC AGCAGATATC 
ACTGACGTTT CAAAGAGCTT CTTGAAGCCA ACACTGTCAA TTGGGCAGAT 
ATTGAATCTG AAGCTAATGG GACCTGATGG GTATGACAAA AGCGTTTGGG 
ATGATACAAC TGAAGCTTCA AATGTTTCAC TTGGTCAGAT CCTGAACCGG 
AGGAATGCTG TTTTCTGTAA CAGTGATATA ACTTCTCAGA AGATATTGTC 
AGGAAAAAGG AAGAAATTTG CCTTCACAGG GCTTTCAGTT TTGTTGGCAA 
AACAAGCCAA GAGGCAAGAG CAAGAGAAAT AGAGGATCAG ATTAGAGCCT 
ATCTGCCCAA GGTTTACCTA AGCCTGAAAC AGTAGGTGAT GAATGTTGTG 
ACCACTATTT CCATGTTCAT GTATGTTAGT TGGTTCTGGC CCTGCGTCCT 
CTGAATCTGT TATTGCCCTC TCACACATGA TTTCTCTAGG ATGACTGGTT 
GCGGATTAGG AACGTAAAAC TGACGGTATT GCAGTCCTTT CTATAAATTT 
GCAACTATGC TTAACATGAG CG

Gene models with high sequence identity

AT2G38370.1 [+] show detail - Plant protein of unknown function (DUF827)
E-value: 1e-53; Score: 207.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF827, plant	2e-22
HMMPfam	Protein of unknown function DUF827, plant	3.3e-66
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT2G38370.1

Model type: Protein coding
Short Description: Plant protein of unknown function (DUF827)
Computational Description: Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G51720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR