K23837

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23837

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23837

Determination of introduced cDNA(s)

  • J013034F12 - Rice Full-length cDNAs - Original: J013034F12

    full reading [+] show sequence

    Nucleotide sequence: J013034F12 - full reading 
    GATTAGCATT GATCCATTCA CAACTTGGAG TACCTCCTTT CTGCTTCTAT 
    CTCTCCTGCA AATGGAGAAT AGCGAGCAAG AGAGGACGGA CTCACCATTG 
    GAGTGTGATT TGAGGAAGTA CCTCCTTCTG TTGGCCACCC TTGTGGCCAC 
    GGTGACATAT GGTGCAGGAT TCAGCCCGCC GGGGGGTGTC TGGCAGGACA 
    CCGAGGCCGG GCACCTCGCT GGTGACTCCA TCATCCGGGA TAGCCAGTAT 
    CGCCGATACC TTATGTTCTT CTACTGCAAC GCGACTGCAT TCGCGCTGTC 
    CATCGTGGTC ATCATCCTCA TCTTCATCCT TGCTATCCTG CATGAGAAGG 
    GGAAGTTACA GATCCCCATG CTTCCACTGC GAGCAGCCAT GGTGGTGGAC 
    CTGCTAAGCC TCATTGGGGC CTATGCTGCA GGGACCAGTC GGGGTGTTCT 
    CACAGCCGGC AACGTCTCTG CACTTGTGGC TACTTTCATC TATATGGTGG 
    CACAGATGGT GGTAACTTTA TGGCTTGACA AGAAACAGAC TCAGGATATA 
    AGCTCAGGTG ATGAGAAGAA AAAACGGCAC CGCAAGGTAC TGATGCTTCT 
    CGCAACATTT GTGGCAAGCA TCACATACAT GGCTGGGCTG AGCGCACCGG 
    GTGGCTACTG GGATAACAAC CAGGAGGGCC ACCATCCAGG CGATCCCGTC 
    CTGTGGGAAC ACCACTCTCG CCGTCTGAGG GCGTTCTTTG TCTGCAACAC 
    AATTGCATTT GTCGCATCCC TGCTCATCAT CATGCTGCTT CTGGACAAGA 
    AGCAGCGGAT CTTCTTACCC CTCGACAAGA TAAAGATCAC CATCACCGTA 
    CGGACTTATG TGCTCTACGC GTACATCACC ATTGCTCTTT TAGGCCTTGT 
    GGGGGCCTAT GTGGCTGGCA GCTGCAGAAA GCCTGACACT ACCATCTATG 
    TACTCAGTCT GGTTGGTGCT GTTCTTTTAT GCATAGGCGC CCTCCAGGCA 
    GTCCTATTTT TTCTGCCACA ACTTTCAAAC ATATCCTGCT TGCCAATAAT 
    TGCAAAGTTA TCATGTTCAC CGGGAGGGCC ATCAGATAGC AGTTCCAGAA 
    AGAATACAAG CAGTAAGACA GATATTCTGG AGAAGGCCCA ATCTCTTGTT 
    GTACTGCTTG CCACTCTTGT GGCAACTGTT ACTTACCAAG CAGGGCTAGT 
    CCCACCAGGT GGTGTCTGGC AGAAAAACCA AGATGGGCAC ATGGCTGGCG 
    AACCAATACT CTTATCCACA CAAGCCAAAC GTTACAAGGT GTTCTTTTAC 
    TGTAACTCGA CAGCCTTTGC AGCATCATTG GTTGTCATAG TTTTGGTCCG 
    GTATAAACCT TTGCTCAGGC GCCGCATTCT AGAGATAACT ATGATTTTGG 
    ATCTGTTTGG TCTCATGGGT GCATATGCTG CTGGAAGCTG CCGGGACATA 
    ACCACATCAG TTTACATCAT TGCCTTGGCA GGCGGTGTTC TAGTCTATGT 
    GGTGATTCAT GTTGTGTTCT TCACGCTTGA AGACAATGAC AAGGAGAAGG 
    AAGTTGGGAA CACGAATTCT GTACGAAATG GTTCAGTTGT GCGCACCCAA 
    AATAATTCAG CTGAGGGCAA TCTTGCTGAG AAAGATTCAT GTATTGACAA 
    AAGGCGCAAG AGGCTGCTCC TTTTCGCTGT TTTGGGCGCG ACCCTCACTT 
    ATCAAGCTGG GTTGACCCCA CCGGGTGGGT TCAGAGTTGT GGATGATGGT 
    TTTGGGCGCC ATGCTGGTGA TCCAATACTC TTTTACAACT TTCCACGCCG 
    TTACAAGGCA TTTCTCTATT GTAACTCGGT AAGCTTCATG TCATCTCTTT 
    CCCTCATCAT ACTCCTCGTG AACCCAAATC TGTATAGGCC AGCTATACAA 
    AGCTATGCTC TTTCGGTTTG CACTGTAGCA GGCTTGTTTG CTCTTCTGGG 
    AGCCTATGCT GCCGGAAGCA CTCAACATCT GAAAACATCC ATTTATGTCT 
    TTGTGTTGGT AGCTGTGGTG CTTTTCATTA TGATCATACT CCTGGTGTGT 
    TTCTATCAAA GTGAGAGCAA AGAGAAGCGA GATGACATAT CCAAGGAGCC 
    CGTTGAGAAA GACAAGGACA GAGCCAAATA CCATGCCAAG CGCAAGTACT 
    TGATGTTGCT AGGGGTCCTG GCTGCAAGTG TTACTTACTC CCAGGCTGGT 
    CTGAACCCAC CTGGCGGTGT GTGGCAGGGT AATAGTGACG GGCATGGTGT 
    GGGTCACTCG GTTATGCATG ACAATAAGAG GTATCGCTAC CTCACCTTCT 
    CCTACAGCAA CTCAACTTCT TTTGTGGCAT CTATTGTTGT TATCATCCTA 
    TTGCTACCGA CGGAACTGCT AAAGAAGAAC AGGTGGCTAA GGGTGATGAA 
    TATTACAATT GTGCTGGACT TGCTCGGCCT ACTGCTAGCC TACGTGGCTG 
    GGTCGAGCAT GAGATGGGAA CCTTCTGGAT ATGTCATTGC ATTTGTTATT 
    GGTGCACTAG GCTGTGCTGC AATCCACAAG TTTTTGTCAT TTGTCAGAAG 
    GTCTCAGCAA CAGGGGCAAG GAAATGATCA GCCTTCTCGG TTACCAGAAG 
    GCGGCAGTCA AGCTTAGATG TTGTTGGCAT GGTAACGAGC GGATTAGAGG 
    GCTCAAGTGT AGCAAACACT CAAAAAGTAC TGCCATTTTT TTCTTATCTC 
    CTTTTCGAGG AAATAATGTT GCTATTTTTG GAATTTTTTT AAAAAATAAT 
    ACGATTTTAA TAGAAAATCG CAAAAATATA GGTCGGTTCG ACGAAATCGT 
    AAATTTAGCA CCCTGTCG

    Gene models with high sequence identity

    1. AT4G03500.1 [+] show detail - Ankyrin repeat family protein
      E-value: 0.00000003; Score: 58.20

     

    InterPro Scan Digest

    See the detailed result >

    AT4G03500.1

    Model type
    Protein coding
    Short Description
    Ankyrin repeat family protein
    Computational Description
    Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03460.1); Has 38634 Blast hits to 17459 proteins in 653 species: Archae - 49; Bacteria - 2374; Metazoa - 20314; Fungi - 3164; Plants - 3215; Viruses - 213; Other Eukaryotes - 9305 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR