K23841

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23841

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23841

Determination of introduced cDNA(s)

  • J033031A17 - Rice Full-length cDNAs - Original: J033031A17

    full reading [+] show sequence

    Nucleotide sequence: J033031A17 - full reading 
    GACCCACCCA CGCGCCGCGC CCTAACCCTA ACCCTAACCC TAACCCTACT 
    CCTCTCGCTC GCCATGTCCG AGCCCGCGTC GCCCCCACCG GCCATGCCCG 
    AGGACGCCGC GCCGCCGCAG CCGCAGCCGG AGCCGGCGGT TCCAGCGGGG 
    GAGGAGGCCG CCCCGTCTCT GGAGAGGAAG GAGGAGTTGC TGCCGGTGGA 
    GGAGAAGGTC TCGGAATTAG ATGAATCACA GTCACAGCTT ATGGGGAGAC 
    TTCGGGGACT CAAGGAGGAT TTGCTGAATT GGAGGAGCAG TTTAGATACA 
    CAAGTGACAA AATACAAAAG CGAACTCTCT GATATCAAAA CTGCGCTGAA 
    TAGCGAAATT GAACAGCTGA GATCAGATTT TCAAGAATTG AGGACCACCC 
    TTAAGAAGCA GCAGGAAGAT GTATCAAATA GTTTGAAGAA TTTGGGGCTA 
    CAAGATGCTA CTGACAATGA TGGGAACAAA GGAAGTGGTG AGGAGAATGC 
    AAGTGAGGGT GTCTCAGATA CCCTAGGGAA CCTGAAATTG GATGATACTC 
    CAAAAAACCA TGATGAAAGC AGTGATGCCA ATGATGAAAA GAATGAAACC 
    ATTGCTGAAG ATGGCACGGT CGATAAAACT GTTAAGGCTG AGAGTGCAAG 
    TGATGAATGA AGTAGCGGAG GAACCAGAAG TAGAACTTGG GCCGCTTCTT 
    TTTCGTGGCT CAGCTGTAGT AATTTTTAGA ACAGAGATAA CTTTGGTTCC 
    TGAAACGAGT CCACGCTCTC TGATGGCTTC GTCGTGTAGT GTTGTTAATC 
    GCTGTCATGA CTTGTGAAAT CCCAGTTCTC TGGAATGGCC GTAGTAACAA 
    TTTTATTGCT ATCAGCAAGT TATCTAAAGA ATAGCCACTG GAATTTTGCC 
    TTTAAAAATT CCAGATATTT TTCTCAAATC AGTTATCTAT GTGATGCCAG 
    CCATTTTAAG GCGGAAGAAT GATGGGTTTT TTTTTTTTGG TAGGCCATGG 
    TTGGTATTGT TGACTGTGGC TATGGATGAA ATAGTATTCA TTTGAACGGT 
    GAGTTTGAAT CAAATCAGCC AATATAAAAT TGGTTAGCTT TGT

    Gene models with high sequence identity

    1. AT4G15790.1 [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: ...
      E-value: 2e-25; Score: 114.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G15790.1

    Model type
    Protein coding
    Computational Description
    unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR