K23919

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K23919

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23919

Determination of introduced cDNA(s)

  • J033114H01 - Rice Full-length cDNAs - Original: J033114H01

    full reading [+] show sequence

    Nucleotide sequence: J033114H01 - full reading 
    GCCAACCATT TCTCCTGGGC CTTGCTCCGC TCCACCTCCC ACCAAACCCT 
    AACCCTAACC CTAACGCGCC TACCACGCGA GGCGCGGCGG CGGCGGCGGG 
    CACCATGTCC GCGGCGGTGT GCGGCAAACG GGCCTCCTCC TTCTTCGAGG 
    ACCTCCCCCA TTCGCCGTCC TCCCCGCCCT CCAAGCGCGC CTGCTTCCGT 
    GGAGGTTCCT CGCCCTCCCG CCCGCTCGCC GACCCGGCCC TCGTCGCCCA 
    GATCCGCCCG CGGTTCCCCT CCGTCGGCCT CGAGGTTATT GAGAACGCGT 
    TGGAGGAATG TGAAAACGAT TTTGATTCAG CAATAAAGTT CTTGTTCAAT 
    TTGCATGTAG GACCCACAGA ATGTAATGTG GATCCTATTT ATCAATCTCC 
    ATCAGGAATG TCTACTGAGC TTCAAGTGGC TGATGAAGGT ATTTTGGCTG 
    GTAATGAAGC TGCTGTACCT ATAGGAAATG CTCCCTGCGC TGATAACTTT 
    CCATCAAGCA GCACCCAGTG GGTTGAGATT CTTGTGAACG AGATGACTAA 
    TGCCTCTAAC ATGGATGATG CAAAGGCTCG TGCCTCTAGA GTATTGGAGG 
    TGTTTGAGAA GTCCATGACC GCTCATGTTG GTGCAATGGG GAGCTTTCAG 
    AAGGAAAGCT CTGTGTATAA GGAACAGTTT GAAGCAATAA CCAGGGAAAA 
    TACTATTCTA AAGAAAGCCG TTGCAATTCA GCACGAGCGC CAAAAGGAGC 
    ATGATGGGAG AAACCAGGAG ATTCAGCAAC TCAAGCAGCT GGTTGCTCAG 
    TACCAAGAGC AAATTAGAAG CCTGGAGGTA AACAACTATG CACTGTCCAT 
    GCATCTTAGG CAAGCTCAGC AAGCCAACTC GATTCCAGGG CACTTCCATC 
    GGGACATCTT CTGAATAACT TCATACCTAA ACCGGAGGTT TCCATAGAAT 
    GAGATATCGT TCACCCAACA ATTAAGGGCA GAGTTCTTGT TCTTGGCTTA 
    TATCCAATAT ATTGCCAAGT TATAAACATA GTTTAATGTA TGTTGTAGAC 
    CTGTGTGTAC ATGCTTGTCT TGCGTTGTGC TGTTGGCCCC CTAAGATGGG 
    ATTGTGTGCG AGCAAGCGCA AAGAAAGCCT AGTTCATTCG AACGGCAGAC 
    AGAATATGAT CAAGTTAGAA AAGAAAAAAA GAAAAGAAAA GAAAAGCGAA 
    AGAGCCTTTA AAATTATTCT CC

    Gene models with high sequence identity

    1. AT5G32440.3 [+] show detail - Ubiquitin system component Cue protein
      E-value: 8e-53; Score: 204.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G32440.3

    Model type
    Protein coding
    Short Description
    Ubiquitin system component Cue protein
    Computational Description
    Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1).
    Link
    InterPro Scan - TAIR