K24029

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24029

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24029

Determination of introduced cDNA(s)

J023069J05 - Rice Full-length cDNAs - Original: J023069J05

full reading [+] show sequence

GAAATTTTGA TACTTCCAAG TCGCGCGTGA TTTGTCAGCT GTTAGTTGTC 
ACACCTACTC ATCAGCCAAC CAATTCGCCA TCAATAGCAA ACCAAGCGGA 
TTGATCATCT CATCTCATCT CATCGACCGA GCATTCTAGC GAGCGAGCGG 
CCAAGCCAGC AAGATCGACT CCTCACTCTC TCACCGATCT AGCAGCAGCA 
GTGGTAGTAG CTAGCAGCGT CAGCGTAGCA AGGGGTTGCG AGAATGGCCT 
CGCCGTCAGC GCCGGGGCCG AAGCTGCAGA AGGCGATGGT GGCGGTGGAC 
GAGAGCGAGT TCAGCCACCA CGCGCTGGAG TGGGCGCTGC GCAACCTCGC 
GCCGACCATC GCGCCGCCGC TGCTCGTGCT CACCGTGCAG CCGCTCCTCC 
CCCTCGGCTA CGTCTCCGCC GCCTCCTTCG GCTCCCCTCT GGGCACCCCC 
GTTGTAGCCC CGGAGCTGAT CAAGGCGATG CAGGAGCAGC AGCAGCAGCT 
CTCGCAGGCG CTCCTCGACA AGGCCAAGCA GATCTGCGCG CAGCATGGGG 
TGGCTGTAGA GACAATGATC AAAGTAGGAG ATCCTAAGGA GATGATATGT 
CAAGCAGCTG AGGAATCAAA GGTTGATTTA CTGATCGTTG GGAGTCACAG 
CCGTGGACCT GTACAAAGGT TGTTTCTTGG AAGTGTCAGC AATTACTGTA 
TGCATCATTC GAAGTGCCCA GTTCTTGTTG TGAAGAAGCA GGAGTAAATA 
AGCTTTCCGA ATCTCAATAA AAATCTTTGT GTATTGTCGA TGTGTTATCC 
TCAACAATGC AATAAACAAA GCCGTATTAG ATGATATTCA GATAACTGAA 
TAATGTATTG TGTAAATAGT CAAGATTATC TTGCAAATAA ATATCCGCTT 
CTTGTTGCTG TAAAGTAAGG GCGTTTCCTT TAGGAGTATC ATCCATGTAG 
CTGGCATCTG TTGCAGAACC GAAGACGATG AACACCCAAC TTGTGTATAT 
ATGTGATATG TGTGTATGTT TTGTTACTTA TCC

Gene models with high sequence identity

AT1G68300.1 [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
E-value: 3e-23; Score: 106.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	UspA	2.1e-34
superfamily	Adenine nucleotide alpha hydrolases-like	1.5e-36
FPrintScan	Universal stress protein A	6.6e-17
FPrintScan	Universal stress protein A	6.6e-17
FPrintScan	Universal stress protein A	6.6e-17
Gene3D	Rossmann-like alpha/beta/alpha sandwich fold	5.9e-36

See the detailed result >

AT1G68300.1

Model type: Protein coding
Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.4); Has 7821 Blast hits to 7529 proteins in 1691 species: Archae - 688; Bacteria - 6019; Metazoa - 129; Fungi - 89; Plants - 708; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink).
Link: InterPro Scan - TAIR