K24049

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24049

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24049

Determination of introduced cDNA(s)

  • J013097G10 - Rice Full-length cDNAs - Original: J013097G10

    full reading [+] show sequence

    Nucleotide sequence: J013097G10 - full reading 
    GCCCGGGAGG CGCACGGGTG GCGGCGTTCG GCGGTTCAGG GAGCGGTGTC 
    CGGCGCCGGA GCTTGCAGCT GAAGAGGCGG TATCTTGCTG AGGCTACAAC 
    ATCGATTTTC TCCATCCACT CATCTCCCAA AACCAAAGAT GGACAACAGA 
    ACAAGGTTTA TGATTTATGC GTAAAGGGAG GCTCGGTGTG TAGTCAAAAA 
    TTGAAGGAGA GGGAGGGAGA GGTAACAAGT TTCTCCCCCA AAACGCTTGG 
    GGGTTCAGCT GAACCCCCAT GCCCCACCGG TAGGTCTCAC AGAATTGTAC 
    ATCATGCAGC TTTTTCTCCT GAATTTCCAG GGTCACGGGA CAGTTTGCAT 
    GGCATGATCA TATTTTGCTA AGGTTCTATT AGAGTGTCAT TCAATGGCCC 
    ATTTCATGGA TTTACGGGCT TTCATCCTGC GTGCACGTGT TTTAAAGCTT 
    TATAGGCAGG CCTTGCGCAT GACTCGCCGA GCTCCTGTGC ATGCATGCGG 
    TCAGACATTT TTAAACCTTG CTTTCCTATC TTTGCTGTCT AATGTTTACT 
    CTTGAAGTTA CAACTAATAA CTGTCCTTGA ATGTTCTTTG TCCAGATGAG 
    TTGAGGCAAA CTGTAAGAGC TGAGATTGAA AAAAATCGCC GTTGCGACGA 
    TAAACAGAAG ATTAAGTTCT TGATCAGTGA AGGTCTGCAA CGATTAAAAG 
    GCCTTGATGA GATGCTTGAC ATGACAGGAA ATAGTTAACC TGAGTTTCAT 
    GTCGGATATG AGGTTCAATT TACACGGAAG CTGGGTTTGC ATGAGCTCCT 
    GCAAAACATT CATTGCTCTG TGACCTCCTA CACCTGATAT TTCCAGAACC 
    CATAAGGCAT CAGGCCACAT GAACTTGTGG CCTCCTGGAT TAGAGTTTGT 
    TAGAACGGAC CCATTCAGAT TCTTTGCCTC GTTCTATCCA GGGGATAGGA 
    AAGATATCAG GCTCAGATAT ATTATCATGG TAGATCATCG ATGGTGTGCG 
    TGCATATGGG ACGAAAATGC AGTTACCGAG GCATCATGCT TGATTTTGCA 
    CACATCTATT CAGTCAAGAT ATGCTAGCGA GCTTTAGAAG CAATTGGGAT 
    TTCTTTAGAT GCTATCTTGA GACCCTGAAT TTCCAGGTGT TACATCTGAG 
    AAAATAGCAG CTAGAGATGG ATTAAGCTGA AGAAAGGTAT CTGACTTGTC 
    GTTTAGGTAC GTCTGCTTTG AGGCGATGAT GTTCAACTTT TTCAGACCCG 
    ATGGCTTACT TTTCATATTT GAGATACTGA CCTCATGTTT CAGTCCTGAT 
    GTTCTTACCA TTTCTTCGTT GCAATTTCTT AGCTGGTATG ATGAGGTCAT 
    TAAACATGTA CTTTCTTTCC AACTATTTCA TTATATGCCA CAATAAAGAT 
    ACTTGGTAAT ATATGCTGGT CCTGCCGTGC TGGTATATAA AAATATGCTC 
    CATGATCTTA AGCTTTTGTT TTGTTGTGAT CATATCAAAT GAAGGGATAC 
    CTGCTAACAT TACTTCCATT AGGTAACTTA TTATGTGACA ATCGCTGTTT 
    TTAGTGCTTT CCGGACCCAA TTTGTGGGGA TCTCACTATC ACCATCGATT 
    GAGCTGGTGC TCACACTGTT AATCTACTCT AGATTTTGGA ATTTTGGATT 
    ATGTTGTCTT ACTTAAAAAT GAAGTGATTC TCTAAGAAAA AAGACAACCC 
    ATGTGAAGCT GCCTGTAGTA CTGATACATT GGTACAAATA ATCACTATCA 
    AATGCTTTCA TTCATTTAAA GAAGGATCAT CGTCATAAAG CTATGTTTGG 
    TTACTAAACA AAGATTCATG CATACATGAT GCATACTCCC AAGTCCCAAC 
    AACACAACTT GTGTGGTCCA TATAATCTTG ATAGGGTTCA TCTGCTCTTG 
    TCCATGATGC CTTGGACTCC TTAACGAACC GGGTTCCCTT TTGTTAGGCA 
    CCGGTTTTCC TTCCCCTTTT TGATTTGCTT TGCACCAGCT ATTTGGCGTT 
    CTATACATAC CAAACTATTT CCTTTTGTTT GCAACTTGAT CTGAAATTTG 
    TTTAGACATG TACAGATATT CTGGATCTAT CATAATTTAA ACACTTTGAA 
    ATTAAATTGC CCTTCGTTCC GTCGCTGGCC TGGCGAATTT TTTTTTAATA 
    CTCTGAATTT GAACTGAGAG TGATAGCCTG ATAAGATTAT CACTACTTAC 
    TTCAGTTCAG ATAGTCACAG AAGAAAATTG CAAGTAGAAA TAAAATAACA 
    TACACTGATC AAACAAAGGG TATGCAGCTA TAGGTTTGTT ATAAACCATG 
    GATTGTCAAC TGACACAACT TTTATGGTAC ACAAAGCATA TTGTAGTGAT 
    ATATTTTTCA GTTATAGATG GTTCTAAGAT AATACTCTTC GAACAGTCTC 
    CTGGCAGTAT GCTAATGCAT ACTAGGCCTC GAAATTCTGT AGAAATCTTA 
    TGGGAATTAG TCAATTCCTT CAATGTCTGC AGAAGTTGGG AAAACATTTT 
    CAGTATTTCT GTGGATGCAT TAGC

    Gene models with high sequence identity

    1. AT1G76065.1 [+] show detail - LYR family of Fe/S cluster biogenesis protein
      E-value: 6e-22; Score: 103.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G76065.1

    Model type
    Protein coding
    Short Description
    LYR family of Fe/S cluster biogenesis protein
    Computational Description
    LYR family of Fe/S cluster biogenesis protein; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 71 Blast hits to 71 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 10; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR