K24051

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24051

Determination of introduced cDNA(s)

J013135A09 - Rice Full-length cDNAs - Original: J013135A09

full reading [+] show sequence

GGCAGAGCCA ATCCCAGTGG CGGCTTCGCC TTCGTGCCCG ACGACCACCT 
CGAGCAGAAG GAAACGAAAG TGTAGGAAGG ATGGTCTCCT CTACTTCCGG 
AGGACTCTCG CCGCCGGCGG TTGTGCTGGC CGTGGCGGTT GTGCTGTCGG 
CGGCGGCGTC ACGGGCGCTG GCGGCGCCGT GCTACCCGCG CGTGTTCTGC 
TTCGGGGACT CGCTTACAGA CACCGGCAAC ATCGCTTTCC TCTACGGCAA 
CGACTCCCGC CGGCCCTCGC TGTGGCCACC CTACGGCGAG ACCTTCTTCC 
ACCGCGCCAC CGGCCGCTCC TCCAACGGCC GCCTCATCAT CGACTTCATC 
GCTGAAGCGA TGGGGCTGCC GTTCGTGCGG CCGTACTGGG GCGGGCAGAC 
CGCGGGGAAC TTCGCCAGCG GGGCCAACTT CGCGGTGGGC GGCGCCACGG 
CGCTCAGCCC GGACTTCTTC CGGGAGAGAG GGGTGCCCAT GGACGACGAC 
ACCGTGCACC TCGACATGGA GATGGAGTGG TTCCGTGATC TGCTCGGCAT 
GCTCTGCACC GGCGGCGACA TGGGCGGTTG CAAGGGCATG ATGAATCAAT 
CTCTTTTCTT GGTTGGAGAA ATCGGAGGCA ATGATTACAA CCTTCCTCTT 
ATGAGCGGCA TGTCCATTGA AAAGATTCGC AACTTCACTC CTAGTGTCAT 
TGCCAAAATT TCTTCCATAA TCACCGAATT GATTGGACTT GGGGCCAAGA 
CACTAGTTGT TCCCGGTAAC ATCCCAATTG GATGTATTCC AATGTACCTC 
ATGCAATTTG AGAGTGATAA GAAGGAAGAT TATGAGCCAA AGATAGGTTG 
CCTTAGGTGG ATGAATGAGT TCTCGCAATA CCACAACAAA CTTCTTGTAG 
ATGAATTGGA AAACTTGCGC AAGCTTCATC TTGATGTGAC CATCATCTAT 
GCCGATTACT ATGGAGCTGC CATGGAAGTT TTCCTTTCCC CTGAACGATT 
TGGAATTGAG GATCCTTTGG TCGCTTGCTG TGGTGGAAGA GGACCTTATG 
GTGTATCTGC ATCTGTACGC TGTGGATATG GCGAATACAA AGTGTGTGAT 
GACCCAGCAA AATATGCATC GTGGGATGGC TTCCATCCAT CAGAAGCTGC 
ATACAAGGGC ATTGCAATTG GCCTGCTACA GGGTTCATAC ACTCAACCTC 
CAATTGTTAG CATCACTAAT TCTTGTCCGC AGATAATTGG CCTTGGTTCC 
TCTGTTGAAC ACAAGGCCAT GTACGACTTG TAATTCTGTA ATTATATTTT 
GTTATTATTA TACACAATAT GTGATTAAAA TATGTAAAGG AATATTGTGG 
TATTGTTGTC TCATTATAGA ACCACAGTAC TGTTCTACAT CACAACTGTT 
ACTAAATGAC ATGTTGACTT TTCC

Gene models with high sequence identity

AT2G27360.1 [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
E-value: 2e-92; Score: 336.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	LATERAL SIGNALING TARGET PROTEIN 2	1.3e-05
HMMPanther	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	1.3e-05
HMMPfam	Lipase, GDSL	2.4e-24

See the detailed result >

AT2G27360.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28610.2); Has 3560 Blast hits to 3506 proteins in 242 species: Archae - 0; Bacteria - 391; Metazoa - 0; Fungi - 2; Plants - 3156; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR