K24107

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24107

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24107

Determination of introduced cDNA(s)

  • J013127L05 - Rice Full-length cDNAs - Original: J013127L05

    full reading [+] show sequence

    Nucleotide sequence: J013127L05 - full reading 
    GATATTTCAT CAGTTCCTCG TAAGAACAGA GAACTCGAGA GGTTGCGCTT 
    CAGTGCCGCG AAGAAAGGAC GAGCTATTCC ACCCTCCCGG TCGGTGCGTT 
    TGCGATGAAG AAGACGGTGG TTCTCTACCC CGGCCTCGCC GTCGGCCACC 
    TGAACCCCAT GATGGAGCTC GCCGACGTCT TCCTGGACCA CGGCTACGCC 
    GTCGCCGTGG CGCTCATCGA CCCGTCGGTC ATGGAGAACG AAGCCAACCT 
    CGCCGCCGCC GTCGCCCGCG CCGTCTCCTC CAAGAGCTCC ACCATCTCCT 
    TCCACACGCT CCCGGGCATC CCGGACCCTC CCTCGCTCGC CTTCAACGAT 
    CAGTTCTTCA AGAACTACTT CGACCTCGTG CGACGCCACA ACGAGCACCT 
    CCACGACTTC CTCCGCTCCG TGCGGGGCCT CCATGCCGTG GTCATCGACG 
    CATCGTGCGC CCATGCCCAT GAAGCCGCGA GGAAGCTGGG AGTCCCTGTC 
    TTGATGTTCT ACCCGTCCAA CGCCGGCCAC CTCGCCGTTA ACTTGCAGGC 
    TCCTCTGCTT GTTGACGGGT TCAAGAAGCA TCTGGGAGGA GATAGTACTA 
    GTCCTGTCGA GTTCTTGGGT GTTCGACCCA TGTCGGCTTC TCACTTGGCT 
    GGCCTTTTTG GGCCGATTAG CGAGGTGAAC AAGGATTTCG AGGCCATGAT 
    TTTTGCCGGT GCGCGCATGA AGGCGGAGTT CGACGGAATC CTGATCAACA 
    CGTCCGTGTC GCTGGAGGAG CGGGCGCTGC GAGCTCTCGC CGACCCGCGC 
    TGCTGCCCCG ACGGCGTGGT AATCCCGCCG GTGTACGCCG TGGGGCCACT 
    GGTCGACAAA GCCGCCGCCG CCGCCGGTGA TGAGAGCAGC CGACATCAGT 
    GCCTCGTGTG GCTCGACTGA CAACCCGACC GCAGCGTCAT GTTCCTCTGC 
    TTCGGGAGCA TCGCCGACGC ATGTGAACAG TCCGACCAGC AGCTGAAGGA 
    GATCGCCGCC GGCCTGGACA AGTCCGGCCA CCGCTTCCTG TGGGTGGTTC 
    GGGCAACCAG CACCCAACAC CTCGACGCGC TCCTACCGGA GGTGTTCTTC 
    GCAAGAACCA GCGGCCGCGG CCTCGTCGTC AACAGCTGGG TGCCCCAGCC 
    GAGCATCCTC CGCCACCGCG CCACCGCCGC GTTCGTGACG CACTGCGGGT 
    GGAACTCGGT GCTAGAGGGG ATCACCGCGG GGGTGCCGAT GCTCTGCTGG 
    CCGCTGTACG CGGAGCAGAG GATGAACAAG GTGCTCATGG TGGAGGACAT 
    GGGCGTCGGC GTGGAGATGG AGGGATGGCT GGAAGGGCTG GTGACCGCCG 
    AGGAGGTGGA GACGAAGGTG AGGCTGGTCA TGGAGTCCGA GCATGGAAGG 
    AAGGTTAGAG AGCGTGTCGA GGCGCACAGA GATGGCGTGG CCATGGCCTG 
    GAAAGATGGT GGCTCGTCGC GTGTCGCGTT TGCCCGTCTC ATGTCTGAAT 
    TACTCAACGT GTAAGGTTGA AAATAGTATG GAATTTCCCA ATTGTATCTT 
    ACTACTCCGT TCAAAAATAT AATAATTTTT C

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 6e-64; Score: 242.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 1.10000150671643e-61
    superfamily SSF53756 1.99999636034521e-31
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    HMMPanther PTHR11926:SF15 1.10000150671643e-61
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 6.79999999999998e-28
    Gene3D G3DSA:3.40.50.2000 0.00000000000000159999889349252
    HMMPanther UDP-GLUCOSYLTRANSFERASE 3.7e-24
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 3.7e-24
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 0.00000000057

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR