K24307

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24307

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24307

Determination of introduced cDNA(s)

  • J013000B15 - Rice Full-length cDNAs - Original: J013000B15

    full reading [+] show sequence

    Nucleotide sequence: J013000B15 - full reading 
    GAGTAGCATA GCAGCGGAAG AACTCAAGCG GAGTGGGCGA AGAAGCAAAG 
    CCCGATGGAT CAACACCAGG TGGTCGGCGA GAATTATGCA AATCCAAAGA 
    CATGTTTCTT CCATGTCCTC TTCAAGGCAG GGGCATTGGC GTTCTACATA 
    CTGTCTGCGC TGTTCGTGAC CAACTTTGTT ATTATCTTTG TCATCACCGT 
    GCTCCTGGCA GCACTTGACT TCTGGGTGGT CAAGAACGTC AGTGGGAGGA 
    TATTGGTTGG GCTGCGCTGG TGGAATGAGA TCGATGATGA GGGCAATAGC 
    GTGTGGAAGT TTGAGTGCCT TGATGGAGAG TCTCTTGCTA GGATGAACAA 
    GAAGGACTCA TGGCTGTTCT GGTGGACTCT GTACTTGACT GCTGCTGCAT 
    GGATTGTTCT TGGGATATTC TCACTCATCA GACTTCATGC TGATTACCTT 
    CTTGTTGTTG GAGTTTGCTT GAGTCTCAGC ATAGCAAACA TTGTTGGCTT 
    CACCAAGTGC AACAAAGATG CCAAGAAAAA CGTTGCAGAT TGGACTAGAA 
    CTACGCTCCT ATCATCTGGT GTCAGGTCAA CAATTCAGTC AGCATTCGGT 
    GTCTAAATAG AGGCGCCCTA ATGTCACATA CAGTGGTGTG CAATTTATGA 
    ATCAGATGAT GCATTCTGCT TTTGTTTACT TTGCCTAGTT GCTTATTGAC 
    CCTATACATC TTTGTGTCCC CTGATATCCT TGGTATTGTT TGATTCACTG 
    TGACAAAAGA TTGAGGGTCA AGATAGGCAC ACTACTCAAC CTACAAGTTC 
    TTGATGTTCT TTGTATTTTT TAGCCTTGTC ACTGGTGACA CTGTATAGCA 
    GCTGAACTGG AAAACGTTCT ACTTGGGATA GATTGTAGTG TACAGCTAAC 
    ATCTTGAAAC ATTATCATAG TACTGCATGG AGTTTGTCTT GTCGAACTTT 
    TAACCATGAG GCAAAAGCAA TGGATGTTGA TGTTGTG

    Gene models with high sequence identity

    1. AT1G09330.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-66; Score: 249.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Protein of unknown function DUF846, eukaryotic 5.3e-54
    HMMPfam Protein of unknown function DUF846, eukaryotic 1.3e-47

    See the detailed result >

    AT1G09330.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR