K24310

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24310

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24310

Determination of introduced cDNA(s)

  • J033126A10 - Rice Full-length cDNAs - Original: J033126A10

    full reading [+] show sequence

    Nucleotide sequence: J033126A10 - full reading 
    GAGTCGAGTG AGTCTCTTAG CGAGGAGAGA CGAGGCGAGA GGAGAGGAGA 
    GGCGCCGCCG CGGCGAGGAG AGCGAGAATC GGAAGGCGAT GGGCAACGCC 
    GGGAGCTCGC CGGAGCAGGC CGCCGGCAAT AATAAGGAGG ACGCGGAGGC 
    CCGCCGCCAG CCGCCGTCCA CCGTGCGATT CTACCCCAGC GCCGACCAGC 
    CCAAGGCCAG GCAGCCGCCG CCCATCAAGC TGGAGGAGGA GGACGTGCCC 
    CCTCCGCCCG TCGCCGACGA GGAGATGGCC CCCCGCAACC TCTGGCAGGT 
    TTATGCTCTT GGAGCGTTTA TTGTGTTGAG ATGGGCCTGG GTTAAGTGGA 
    AAGAAAGCAA GGAAAGAGAT GATTCGCCTG ATGGCCGATC CCCGGACGGG 
    TCTTCTTAGT TTGCTCCAGA AAGCTTTAGT CTCTGCTTTA AATCCTAAGA 
    AGATAAAGAT GTTGTGCGAT GATGGTGCAC CTCTCTAATC TATGTCCATC 
    TGATTAGAGT TTTTCTTCCC CGTCATTGTT GCCTTGTGTT TGGATTCTGT 
    ATTTGCCCAT CATGCGCAAG TGACTTCCTT TTCCTTGCTG TCATGTTAGA 
    ACTTGCAATA TCTTTAAGTG AAAGGCTTGT AGTAAAAGTA AAAGACCTCT 
    TTTAATACTA CCATCCATGA TCCAACTGC

    Gene models with high sequence identity

    1. AT3G52230.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 9e-06; Score: 47.40

     

    InterPro Scan Digest

    See the detailed result >

    AT3G52230.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR