K24326

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24326

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24326

Determination of introduced cDNA(s)

  • J013170O15 - Rice Full-length cDNAs - Original: J013170O15

    full reading [+] show sequence

    Nucleotide sequence: J013170O15 - full reading 
    GGGTGGCTCC TGATTCGTTT CCTCCGTCTC ACTCCTACTC CTCGGCTGCC 
    CCCATTCTTC TCTGGATATT TTTCTTTTTC ATCTTCTTTG AGTTGGAGGG 
    CTTGATTTTA GGGGGGACTG CTCGATCGGC AGGGTTAATT CCGATCTCTT 
    TAACCTTCCC GGATCAGAGC CGGGATCAGT ATTAGGCTTT TTGCTAGAAG 
    CACAAAACAA AAGGAATGCT GGAAGATGTG CTTCTATGAT AGAGAGCTAC 
    CTTGTGTGGG AATTGGAAAG GTAGCTCAAA ATATTTATGC TTTGTGTGCT 
    CTTGATGATA GTGAAGTACG GGTTTATGCA CAGCAAGTGC TCCTTGTGCA 
    TTTGCACGAT GGGGCTAGAT GTGGCAGTTC AACCATCATG TTAGATTACC 
    ATCTTGTTGG GGACGGTTGA AATTATTTTT CATTTATTGC CTCTCTCATC 
    TGATACTCCC TCATCAATCA TCATCACTAA GTTACATGAT TAGTGCTTTC 
    TGAATACATA AGGCATTTGA TAAGATGGTA GAACAAAAGG GGAATATTTT 
    GATGAAGAGA TATGAGATAG GAAAATTACT TGGGCAAGGA AGTTTCGCTA 
    AAGTTTACCA TGGCCGTAAT ATTAAGAATT CACAAAGTGT TGCAATCAAG 
    GTGATTGACA AAGAAAAGAT ATTGAAATGT GAGCTTATGG ATCAAATAAG 
    AAGAGAGATT TCAGTGATGA ACCTAGTAAG ACATCCGTGC ATTGTTCAAT 
    TGTATGAGGT GATGGCTACC AAAACTAAGA TATATTTTAT CCTAGAGTAT 
    GTGAAAGGGG GAGAGTTATT CAACAAGGTT CGACGTGGAA GACTAAAGGA 
    AGAAGTTGCA CGGAAGTACT TTCAGCAGTT AATTAGTGCT ATTGACTTTT 
    GTCATAGCAG AGGGGTTTAT CATCGTGATC TAAAGCCAGA AAACCTTCTT 
    CTTGATGAAA ATCGAAATTT GAAAATCTCA GACTTTGGTT TGAGTGCACT 
    TGCAGAATGT AAGAGACAAG ATGGGTTGCT CCACACAACT TGTGGAACTC 
    CTGCATATGT TGCTCCAGAA GTGATTAACA GAAAAGGATA TGATGGTGCA 
    AAGGCTGACG TATGGGCTTG TGGAGTGATT CTTTATGTAC TATTGGCTGG 
    TTATCTCCCA TTTCAAGATA AAAATGTGAT AAACATGTAT AAGAAGATAT 
    GCAAAGCGGA ATTCAAATGG CCAAGTTGGT TTTCTTCTGA TATCCGAAAG 
    CTTTTGCGAC GTATTCTTGA TCCAAACCCT GCGACACGGA TCTCAGTTTC 
    AGAAATTATG GAAGATCCTT GGTTTAGAGT AGGTCTTAAT TCAGATCTAC 
    TTAACAAGAC CATACCAACA GATAAAGTTG ATAAAGTTAT GCATGTTGAC 
    ATGGATTCAA CATTTGGTAA TTTAAGCAAC AATATAAATG AAGGAAAACA 
    AGAAGCAGAA AATCTTACTA GCTTGAATGC TTTTGATATT ATTTCTCTTT 
    CATCAGGATT TGATCTTTCT GCTATGTTTG AAGATGAAAA CAGCAAAGAG 
    GAATCAAAAT TTACATCCAC TAACACAGCT ACGACAATCA CCAAAAAGCT 
    TGAGGATGTT GCGAAGAATT TACGATTAAA ATTCTTGAAG AAAAATGGTG 
    GTTTGTTAAA GATGGAAGGA TCAAAACCTG GAAGGAAAGG TGTAATGTCC 
    ATCAATGCTG AAATATTTCA GATCACACCA GATTTTCATT TAGTGGAATT 
    TACGAAGATA AATGGTGATA CACTTGAGTA TCAAAAGGTC AAACAAGAGA 
    TGAGACCAGC ACTAAAGGAT ATTGTATGGG CTTGGCAAGG TGAGCAGCCA 
    CAACCACAAT CATTGAACGA ACAGTCTTAA TGTTAAATAT TTTGACAAGT 
    GAAATGACAG TAGAGATTGT GGCAATGTGT TGATGTGTTG TATGTGCTAT 
    TAGTAATCAA TAATGTACTT TTCTAAAAAA GTTTGTCATT TGATTTTTCA 
    TTATCATGTG TTCAGTATGA AACGATAATT GTATTGACCA TTTAATTGAA 
    AACATGTTTT ATTCACTTTG CCATGTGTTC T

    Gene models with high sequence identity

    1. AT5G58380.1 [+] show detail - SOS3-interacting protein 1
      E-value: 3e-149; Score: 526.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 4.2e-93
    HMMPfam Serine/threonine-protein kinase-like domain 8.7e-78
    HMMPfam NAF domain 4.3e-21
    ProfileScan Protein kinase, catalytic domain 52.894
    ProfileScan NAF/FISL domain 13.156
    HMMPanther CBL-interacting protein kinase 9.1e-225
    HMMPanther Calcium/calmodulin-dependent protein kinase-like 9.1e-225
    HMMSmart Tyrosine-protein kinase, catalytic domain 6.8e-14
    HMMSmart Serine/threonine-protein kinase domain 4.7e-108
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    Gene3D no description 1.7e-66

    See the detailed result >

    AT5G58380.1

    Model type
    Protein coding
    Short Description
    SOS3-interacting protein 1
    Curator Summary
    Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.
    Computational Description
    SOS3-interacting protein 1 (SIP1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 2 (TAIR:AT5G07070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR