K24329

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24329

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24329

Determination of introduced cDNA(s)

  • J013059J16 - Rice Full-length cDNAs - Original: J013059J16

    full reading [+] show sequence

    Nucleotide sequence: J013059J16 - full reading 
    GGTTTTACCC CACAACAACT CACATTTGCT GCAGCGTGGC TGAATGGCCG 
    ACGACCTCTG CATTGTCGAT TTGTCATTGC GAGATCGAAA CAACCACAGC 
    TGCTTGAATT GCTTGTGAAG TTGTGCTTGC GTGCAGAATT GCAGATGCCT 
    TTTCTTGCCT TTGGACTTCA TTCTTGTACA TAAACAAAGG ATTTGGAGTA 
    GAGAAGATAA AATAAAAGTT CAGATGAGAG AGAGAGAGAG AGAGAGAGAG 
    AGAGAGAGAG AGATGCAAGG GCAGTGGGTT CCTCTGGCAC CATGGTTTGT 
    TCTCTTTGAC TAGTTATTCA TTGGGAATGG GGTTCTGGAG TTGCAGAGCA 
    CGCCTCTGCG AGAAGGATGG ACCTCTTGAT TGGATTATCA GATCTATCTC 
    CTCTTTTTCC TTAGGACTTG CTTGTTTTGG GAGATTTGGA GCTTCTCAAG 
    TATATCCATG CTCATTGGAG CTGCATGTCA TGTCCTGGAT GCTCATCGAT 
    TGCGTATGGA GCATCTGAAG AGATTGGCCC ATTTAGGATT AAGACAAACG 
    GGACAGGGCT CTATCTGAAC AAGTACTCAT GGAACAGAGA GGCAAACCTC 
    CTGTTCCTGG AATCACCTGC CGGAGTTGGC TTTTCATACT CCAACACCAC 
    CTCTGATCTC AAGACATCTG GTGATGAGAG GACAGCTCAA GATGCGTTGC 
    AGTTCTTGAT CAGTTGGATG ACCCGCTTCC CACAGTATCG GCACCGGGAT 
    TTCTACATTG CTGGAGAAAG CTATGCTGGA CATTACGTTC CCCAGTTGGC 
    AAGGAAGATC GTTGAGTTCA ACAAGGCCTC ACCATATCCT TTCATCAACC 
    TCAAGGGGAT CCTTGTGGGC AATGGGGTGA CTGACAACTA CTACGACAAC 
    ATCGGCACGG TGACCTACTG GTGGACGCAC GCCATGATCT CGGACACCAC 
    CTACAAGGCC ATCATGTCGT CGTGCAACTT CACCAGCGCC AACGTCTCCA 
    GGCTCTGCAA CCGCGCCATG AGCTACGCCA TGAACCACGA GTTCGGCGAC 
    ATCGACCAGT ACAGCATCTA CACGCCGTCC TGCGCCGCCG CCGCCGCCGC 
    CAACGCCACC GGCCGCCGCC GCGGCAAGGC CGCCGTGCTG AGGTTCAAGG 
    ACACCTTCCT ACGGCGCCGG TCGTTCGGCT ACGACCCCTG CACGGAGACA 
    TACGCCGAGA AGTACTACAA CCGGCCGGAT GTTCAGAAGG CCATGCATGC 
    CAACATCACT GGGATTCCTT ACAGATGGAC AGCCTGCAGT GATGTGCTCA 
    TCAAGACGTG GCGAGATTCA GAGTTCTCCA TGCTGCCGAC TTACAAGTTG 
    CTGATGAAGG CCGGGCTGAG GATATGGGTG TTCAGTGGCG ACACGGATTC 
    AGTCGTTCCG GTTACTGCAA CGAGGTTTGC GCTTAGCCAT CTTGGACTGA 
    AGACGAAGAT CCGCTGGTAC CCTTGGTACT CAGCTGGACA GGTTGGAGGA 
    TGGTCTGAGG TGTATGAAGG GCTCACATTT GCGTCAGTGA GAGGTGCTGG 
    GCATGAGGTG CCACTGTTTC AGCCAAGGAG AGCATTCAGG ATGTTTCAGT 
    CGTTCTTGGC AGGGGAGCCA TTGCCAAAAT CCTGATGGTT TCCTGCCAAC 
    AACTGATGTC TAGCTACAAA GTCTAGAAAT CTGTAAAAGA TGCTTGGTAG 
    AGGTGCAGTG TAGTTGATAG GTGAGGAGTG TGATTGATTG GTGTTGGGAA 
    AAGGATAATA AGAGAATAAG GATGGTTGTG CCATGGAAAC CATGGGCATC 
    GCAACAAGGA GCTAATAAAC TTGAAGCCTT CCGCTCTGTT TACC

    Gene models with high sequence identity

    1. AT4G30610.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
      E-value: 4e-166; Score: 582.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Peptidase S10, serine carboxypeptidase 3.6e-29
    FPrintScan Peptidase S10, serine carboxypeptidase 3.6e-29
    FPrintScan Peptidase S10, serine carboxypeptidase 3.6e-29
    FPrintScan Peptidase S10, serine carboxypeptidase 3.6e-29
    HMMPanther SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE 4.6e-227
    HMMPanther Peptidase S10, serine carboxypeptidase 4.6e-227
    HMMPfam Peptidase S10, serine carboxypeptidase 5e-117
    Gene3D no description 2.6e-114
    superfamily alpha/beta-Hydrolases 8.3e-115
    PatternScan Peptidase S10, serine carboxypeptidase, active site 0
    PatternScan Peptidase S10, serine carboxypeptidase, active site 0

    See the detailed result >

    AT4G30610.1

    Model type
    Protein coding
    Short Description
    alpha/beta-Hydrolases superfamily protein
    Curator Summary
    Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.
    Computational Description
    BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR