K24336

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24336

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24336

Determination of introduced cDNA(s)

  • J023094P22 - Rice Full-length cDNAs - Original: J023094P22

    full reading [+] show sequence

    Nucleotide sequence: J023094P22 - full reading 
    GATTTCGTCA CCGCCGAATC CCCCAGCAGC CAGCCATGTC GTCGTCGGCG 
    TCGCGCGCCG CCAGCCTCCT CCGCCGCACA TCCTCCGCCC TGTCCCGCCG 
    CTGCGCCCAC TCCTCCTCCG CCGCCGCGCC GTCCCGCCCG CCCGTTCCGC 
    TCCCACGTTT CCGCGCCGCC GCCGCCGCCG CCTCCTCCTC GCCGTCCTCT 
    GGGATCACCT CCCGCCGCTT CCTCGCGTCG AAATCCCCGT CGTCGTCGTC 
    GCCCTCCAAG GCCTCCGCCG ACGAGAACCT GGTGCGGGTC ATCGACTCCG 
    AGATCGAGTG CATTGTTCAG TCGGAGGAGG GCGCCGCCTC CGCGAAGCAA 
    ATTGATCTAC CAGAAGACTT CCCTTTTGAG ATAATCGACA ATCCTGGTGA 
    CCAATCCATA ACACTCAAAA GAGAAATTGC AGGAGAGACT ATTAAAGCTA 
    CTGTCTACAC AAACTTTGAT ACACAAGATT TGAATGAGGA TGGCGATGAT 
    AATGAGAACA ATGAGGAATC TTTTAAGCCA GCAATCCAGA TGGTCGTCAC 
    TGTTGAGAAA CCAGAAGCCT CCATCTTGGA ATTTGAATGC CACTTCAATG 
    ATGATGAACT GGC

    Gene models with high sequence identity

    1. AT5G02050.1 [+] show detail - Mitochondrial glycoprotein family protein
      E-value: 1e-11; Score: 66.60

     

    InterPro Scan Digest

    See the detailed result >

    AT5G02050.1

    Model type
    Protein coding
    Short Description
    Mitochondrial glycoprotein family protein
    Computational Description
    Mitochondrial glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 498 Blast hits to 497 proteins in 162 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 134; Plants - 219; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR