K24410

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24410

Determination of introduced cDNA(s)

J033124H02 - Rice Full-length cDNAs - Original: J033124H02

full reading [+] show sequence

GACCGTAGTG ACTAGCGAGC GCTGAGTGCA TCACCGGCCA AGCAGCCAAG 
CGGCGGCGGT GCCAACCGGA GGGGCGGCGA GGCTTGGCGC TCGCCCGCGC 
ACCACCCTCC TCCTCCCCCC GAAGAACGGC AAGCGCCAGC GATGGAGTAG 
CTTGGTGGCG GAGGGCTTGA TGGCGGAGGA GCTCGGTGGC GAGACGGCCC 
GAGCGGCGAC GGCGCCGGGC AGCGACAACG ACGGCGACGC CAGCCTCCTC 
TTCTCCTTCC CCGCTCTCGC CTCCTCCTCC TCCAGCCCGT CGACTACCTC 
GCCCCTTTCC CCTCTATCCT CTAGCATAGT GTGGGTCCCG CTTGAGACGT 
GAAGAACTCG TAGCCAAAGT TGGCTACTCG GACCTGAGCA AGCTGCACGG 
TTTGACGATG TGGCATGGAA TATTCGTTTT TGGGTGTGGA GGCTGAATGC 
CACTTAAGCC CACTGTGAAT GGCCATGGCC TAGGAGGACA TGTCTACCGC 
AGCGGATAAT CGAGGCCGTT GATTGCTGAT CCCAATGACA GGTGGAAATA 
TTTCTCTGGT CGATGATTGC GTTGATTCGT GTTCAGGCAA AGGCCGCTGA 
ATCCAAAGCG GATCACAGAA TTGGCACGCA CAGAAAGATA ACAGTTAAAA 
ACGAAGGAGA AAAAAAAAGT TGGGAGAAAA GCGGAGCAGG GAAGGAGACA 
GGGGAGAAGC GTCGAGAAAC GCACCGCCCC CTAGCCCTAG GCTTGCCTCT 
TTCCGCGCCG GTGGGTGGGT GGATAGGGGA GTAGGAGAGG GGGATCTCGG 
CCACCGCCCA CCGCCACCGC CGCGCCGCCG CCGCGCGCGC GCGCGCATCG 
CGTCACGATC TCGCGAGACC CCGAACCCCA CGAACCCTCG CCGCGTCGCC 
GCGGGCCGTC GCGGTGGGGG AGGAGGAGGA GGGGTGGGTA CTCGTTCTCC 
CAGTGGGGGA GGGTTTTGCC GCGGCGGGAC CAGTGGCGCT GTTCCGGGGC 
TGCTTCTCCT TCGGGTCGGG GGGGCGGAGG AGGCCCGCCG CCTCGCCCCT 
GCCCTCGCCG CCGCGGGCGC CGCCGCTAGC CTCCTCCGCC TCCGCCGCCG 
CCGCGGCGCT AGCGGCAGCG GACGACGGCG CCAAGATGAA GGGCCTCTTC 
AAGTCCAAGC CGCGGACGCC GGCAGACGTC GTGCGGCAGA CGCGGGAGCT 
CCTCATCTTC CTCGACCTAC ACTCCGGATC ACGCGGCGGC GACGCCAAGC 
GCGAGGAGAA GATGGCAGAA TTAAGCAAAA ATATCAGGGA GTTGAAGTCA 
ATTCTTTATG GCAATGGTGA ATCTGAACCT GTGACTGAGG CTTGCGTGCA 
ATTGACCCAA GAATTCTTCA GAGAGAACAC TTTACGGCTT CTAATTATTT 
GTCTTCCGAA ATTGAACTTA GAGACCAGGA AAGATGCAAC TCAAGTTGTT 
GCAAACTTGC AAAGGCAGCA AGTCTCCTCA AAAATAGTTG CATCTGAGTA 
TCTAGAAGCA AATAAAGATC TTTTGGACAC CTTAATTTCT GGGTATGAGA 
ATATGGACAT TGCTTTGCAT TACGGCTCTA TGCTGAGGGA ATGTATTCGC 
CACCAAAGTA TTGCAAGGTA CGTTTTAGAG TCTGACCACA TGAAGAAGTT 
CTTTGACTAT ATACAACTTC CAAATTTTGA CATTGCATCA GATGCTTCTG 
CGACCTTTAA GGAACTTCTG ACAAGGCATA AAGCTACCGT GGCAGAATTT 
CTGTCAAAGA ATTATGACTG GTTCTTTTCA GAATTCAACA CTAGGTTGCT 
ATCATCAACC AACTACATAA CAAAAAGGCA GGCTATCAAG TTCTTGGGAG 
ACATGCTGCT TGATAGATCC AACTCTACAG TCATGATGCG TTATGTTAGT 
TCAAAAGATA ATCTTATGAT TCTCATGAAT CTCTTGAGAG ATTCAAGCAA 
AAATATTCAA ATTGAAGCAT TTCATGTGTT CAAGTTATTT GCGGCAAATA 
AAAACAAGCC AACTGAGGTT GTAAACATAC TAGTCACAAA CCGAAGCAAG 
CTTCTCCGAT TTTTTGCCGG ATTCAAGATT GACAAAGAGG ATGAGCAGTT 
CGAGGCAGAC AAAGAGCAGG TCATAAAGGA GATATCTGCA CTTTAGTGTC 
CTTCTGTATA CCTCGCGGAG GCTTTTGGTC AATGCGTCTG CCTAGTGGTC 
TCTCGTGGAC TACTGTATTT ATCCCACCCC GAGAGGCTTT CGCATGGATG 
GATTCACCGC GAGTATATTA ACGCGGTGGC CGGTGGCTGG ATGGTGTTGC 
TGGGTGATTT GTTAGAAGGT TCTTGTGTAA TAATATACTT CTACATATTG 
CTATATGTTA CTTGGATTCA GGCAAATCAT ATTGATGGTG C

Gene models with high sequence identity

AT5G47540.1 [+] show detail - Mo25 family protein
E-value: 1e-147; Score: 521.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Armadillo-type fold	1.9e-108
HMMPfam	Mo25-like	1e-119
HMMPanther	MO25	1.8e-123
HMMPanther	MO25-RELATED	1.8e-123

See the detailed result >

AT5G47540.1

Model type: Protein coding
Short Description: Mo25 family protein
Computational Description: Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link: InterPro Scan - TAIR