K24544

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24544

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24544

Determination of introduced cDNA(s)

  • J013063L01 - Rice Full-length cDNAs - Original: J013063L01

    full reading [+] show sequence

    Nucleotide sequence: J013063L01 - full reading
    GACACAAACG CAAGCGCAAC GCAAACGCAG CAAGCGACGC CACCCCCCAC 
    CCACCTCTTC CTCGAGAAGA AAAGAAAACT GGAGGAAAAA AAAAAAGGGG
    GAAGAAAAAG AGAAGAAGAG GCAGGCAGCG GCGGAGGGAC GGCGACGGGG
    GTCCTCCGAT CTGGAGTCGC GTCAAACCCC CCCGATTCCT ATCGTGAATA
    CCATAACCAT CCTTTGTTCT TTTGAAGTGT TCAGTGCATA CAACTGCTCC
    CTGTAGAGGT TCTGTATCTG GCTGGATTCC TGCTGGAGAA GTGAGGAAGT
    ATCTTAACGA GAAGTTGAGA ACATGTTCTC ATGATTCCTG CAAATTTGTT
    GGAACCTACG AGCAGCTGCG TGAACACGCT AGAACCGCCC ATTTGCTTGC
    AAAGCCTGCA CATGTGGATC TTTCGAGGAA AAGGACTTGG GATCGCCTTG
    AGCGTGAACA GGAGGTTGGT GATGTCATAA GTGCAATTAG GTCACAGAAT
    CCTGGGGCAA TAATAGTTGG TGACTATGTT ATTGAGACTA GAGATGCGAT
    GTCTCCTGAT GAAAACACTG GAGATGAAAG CAACGATGAG TGGTGGCGCG
    ACTCAATAGA ATCACCTGAT AACAGGTATA ACTCCCCTAG GCTCTTGCCG
    AATGAAGCTC CAGAATCATC AATAATCTGG GCAGATGAAA GGCATGGACT
    GCCAAGGTTT CAGCCTCAGA ATAACAGAGT GTTGCCCCGG TTTTCGTTCA
    CCAATAGGAG CAGCTCACGG TCAGATTGGC ACCGTATCCG ACGGCCGAGT
    AGACAGAGCC TAGCGCGTCG AGGCTTGTTG AATCGACCCT ACAGGAACAA
    CAGCGACTAT CATGGCTTCC GTCCCCAGCT ATTTGATCAG CCGAATGGTA
    GTAGCCATCG TTCAGGTATC AACAGGAGCC TTGATGACCC ATCATTTGTG
    CCCAGACGGC AGCGTTTGAG ATACACCCAC AGGAGCCATC ATATCCGTGA
    TTGATCTAAA GCAGCATTGC TCTTGCTGTA TAAATTAATT TGGCAAACAG
    CCAAAGCTAT CCTTGTAAAT AGTAATGCCA AACTCAAATT TATTTTTCTT
    TAGTTGGTCT ACGCTATATA TCAATGTATA TTATCCAGCA GTCTAGTCTA
    GATGCAAAAC TTTGCTCCTT AAATATCATC TTCGGTACCG TCACTTTCGA
    ATGCAATTCT TTGTTGGCTT

    Gene models with high sequence identity

    1. AT3G24740.2 [+] show detail - Protein of unknown function (DUF1644)
      E-value: 2e-30; Score: 130.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G24740.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF1644)
    Computational Description
    Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR