K24634

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased length (PATO:0000574) (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24634

Determination of introduced cDNA(s)

J023007O11 - Rice Full-length cDNAs - Original: J023007O11

full reading [+] show sequence

GACCTGAGCT GAGGCCGCCG CCGCGTCGTC GTCGTCGTCC GTACATCGCC 
GCCGGATCGA GCCGCGCCGC AAGCGGTAGG AGATGAGGCC CGCGGTGAGC 
AGGGCCGCCT TCGCGTCCGT GCTTCTGGCG CCGCGCGCGG TCGGGGTCGC 
CGCCCGCTGC GCCTCCTCCT CCTCTTCGGC CGCCTCCCCG TCGGTCGCCG 
CCGCCACTTA CGATCACGCG TCGTTTATTA AGGAGGTCGC CGCAACCGAT 
CCACCGGAGC ATCTTAGCTC GTTGCTGAAT GTGCTCCAGG CACGAGGTGA 
AAAGCTAGTT TCTCCAGGGG CGAAAAGAGG CCTGATTCCA CTTGTTGTTC 
CCTTAGCAGA AAGTCCAGCA GGTAATTTAA CATCACTACT GAGATGGCCA 
ACTGCTCCTA GCGGGATGGA AATGCCTGTG GTGGAAGTTC GTAATCACGG 
CCTATGGCTT TTGGCTAAGA ATGTGAACCA ATATATTCAC AGAGTGCTCG 
TTGAGGCTGA TATCAATGGT TACGCTGATG ATTTATGGTC TGCTGTGGGG 
GACACTGGTA AAAAACTTTA CACAAAAGGT GATTTCAAAG AGTCACAGAT 
GGCAGATCTT GATGCCTATT TGTTGAAGAA GGTTGGCCTC TTTCCAGATG 
TTATAGAGAG AAAAACATCA CGCCATTTCG AAAAAGGAGA TTATGTGTCA 
GCTCTAATTA CTGGAGAATT CTACACTAGA GATCAATTTC CTGGATTTGG 
AAGGCCCTTT GTGTTCAACG CAGAGATATT AAAAAGAGTT GGGCGTACAA 
CCGAAGCCAA AGATTCAGCT CGAGTGGCTC TGAAGTCACC ATGGTGGACA 
CTGGGCTGCA GTTATGAAGA GGCTGCTGAA TTAGCTGGGT GGGAGGATGA 
GCAGATTGAG TTTATACGAG AGAAGGTTAG TGAGGAGGGC AAGCGTGAGG 
ATCTGAAGAA AGGAAAAGCT CCAGAACAGG TGGTTCTTGA CGAGGCAGCA 
TTTCTAATGG ATTTGGCATC GGTGGATGGT AATTGGGACG ATGTTGTTGA 
TCGAATTGCT GGATGTTACA GAGAAGCTGG ACTTGATGAT ATTGCGAAGT 
TCATTGCTTA CCGGGAATAG TTGTTATATG CATGTATTCC TACTGAAATC 
GATAGTCATT TTTGACTCGC ATGTACTAGG GTTTGACTCG CGTGTACTGG 
TCCTGAAACA AACAAATTTG GTTGTTTAAC TAAAAAGAGG AAACAGTCGA 
GTCCGTTTGA TTT

Gene models with high sequence identity

AT4G34090.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 2e-112; Score: 402.00

InterPro Scan Digest

See the detailed result >

AT4G34090.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR