K24947

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24947

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24947

Determination of introduced cDNA(s)

  • J013057B08 - Rice Full-length cDNAs - Original: J013057B08

    full reading [+] show sequence

    Nucleotide sequence: J013057B08 - full reading 
    GATGGTTACC CAGCTCACCT ACCTAGCTGC ATCAGCAGGA GTGTGCTTGG 
    CTTCAGCTCT AGCCATCGCC TTGCTGTCCA TCGCCCTCTA CATCATCGGC 
    GTCGTCGCCT CCTTCGCCGT CCTCTGCGCC AAGGAGTTCG CCGAGAGAGC 
    CCACGACCGG CCGCCGCTCG TCGGAACAGT TTTCCGGCAG CTCAAGAACT 
    TCGACAGAAT GTTCGATGAA CATGTCAACT ATGCAACCGC GCATCGCACC 
    AGCAGGATTG TGTATCCCGG TCACTGCGAG GTCTTTACTT CTGATCCGGC 
    CGTCGTTGAG CATGTCCTCA AGAACAGCTT CAGTAAATAC AGCAAGGGGG 
    ACTTCCTCAC TACAGCCATG AAGGATCTCT TTGGAGATGG AATTTTTGCA 
    ACAGATGGGG ATATGTGGCG TCATCAGAGG AAGCTAGCGA GCTACGAATT 
    CTCAACCAAA GTGTTACGTG ACTTCAGCAG TGACACATTC AGAAGGAATG 
    CTGCAAAACT GGCAGAGAAG ATCTCATGTG CAGCAGCTAA CAGAATTAGC 
    ATAAATATTC AGGATCTTTT GATGAGAGCA ACTATGGACT CAATCTTTAA 
    AGTGGGGTTT GGTTTTGAGC TCAACACACT ATCTGGATCA GATGAATCTG 
    GCATTCAATT CAGCAAGGCC TTTGATGAGG CAAACTCCCT TGTTTACTAC 
    CGATTTGTTG ACATAATGTG GAAACTGAAA AGGTATCTTA ACATTGGATC 
    AGAAGCCAAA CTCAAGAGGA ACATTCAGAT CATCGACAGC TTTGTGATGA 
    AACTGATCCA TCAGAAGAGA GAGCAAATGA AGATTGCAGC TGACTATAAA 
    ACCAAAGAGG ACATCCTATC AAGATTTGTA CTAGCAAGTG AGCAAGATCC 
    TGGAACAATG GATGACCGCT ACTTGCGTGA CATAGTCCTC AACTTCCTGA 
    TAGCTGGGAA AGACACCACA GGAAATACCC TTACCTGGTT CTTCTACCTG 
    CTATGCAAGA ACCCCATAGT GCAGGATAAG GTTGCCCTTG AAATCAGAGA 
    GTTTGTTGAA TGGAGCAAGG AAGATAACAC TATTGAAAGC TTCACCAAAC 
    GACTGGACGA AGGTGCAATT AGCAAAATGC ACTACCTCCA GGCTACAATT 
    TCCGAGACAC TCCGGCTATA TCCTGCTGTC CCAGTGGATG CTAAGATGGC 
    AGACGAGGAT GATGTACTAC CAAATGGCTA TAGAGTGGTA AAAGGAGATG 
    GAATTAACTA CATGATTTAT GCCATGGGGA GGATGACATA CCTTTGGGGT 
    GAGGATGCAC AGGAGTTCAG GCCTGAAAGA TGGCTTGTGA ATGGAGTTTA 
    TCAGCAAGAG AGCCCGTTCA AGTTTGTGTC TTTCAATGCT GGGCCACGTA 
    TCTGCTTGGG GAAAGAATTT GCACACAGGC AGATGAAGAT CATGGCTGCT 
    ACCCTGATAC ATTTCTTCAA GTTCAGACTG GAAGATGAAT CCAAGGAGCC 
    AATCTATAAA ACAATGTTCA CTCTCCATAT CGACAATGGT CTCCATCTGC 
    TTGCAAACCC TCGAGAAATT TCACCATGAA CCCCAAACAA GCTACTGCAT 
    CCTTTTGTTA TTTTATTGGA ACATATGCAT TTCTAACATC CGTCCTATTA 
    GGCAAGTAAT AATAATCTGT CCCAAGTAGT CGTATGAAAA CAACAAAGTA 
    GCAATGGGAC AATTTGCCCG GTAAAAGTAA GGTGCTTGTA CAATTTAATA 
    TGCTTGTAAT AGGGTGCTTA AAGAAAGAGG ATGCAGCTAT ATCATCAACT 
    ACGTATTTAA GCTTCATTTC TTTGGATGCA AGAACCTCTT TGTATGTGCC 
    TGGAAAGCTA TAGCTTATAT TGTCCATAAC TAAAGATAGT CTTTGTGCAT 
    AAGAAACTTT TAAGC

    Gene models with high sequence identity

    1. AT2G45510.1 [+] show detail - cytochrome P450, family 704, subfamily A, polypeptide 2
      E-value: 2e-150; Score: 529.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Cytochrome P450 6.3e-102
    PatternScan Cytochrome P450, conserved site 0
    FPrintScan Cytochrome P450, E-class, group I 2e-16
    FPrintScan Cytochrome P450, E-class, group I 2e-16
    FPrintScan Cytochrome P450, E-class, group I 2e-16
    FPrintScan Cytochrome P450, E-class, group I 2e-16
    FPrintScan Cytochrome P450, E-class, group I 2e-16
    FPrintScan Cytochrome P450, C-terminal 3.5e-13
    FPrintScan Cytochrome P450, C-terminal 3.5e-13
    FPrintScan Cytochrome P450, C-terminal 3.5e-13
    FPrintScan Cytochrome P450, C-terminal 3.5e-13
    Gene3D Cytochrome P450 5.1e-93
    HMMPanther CYTOCHROME P450, SUBFAMILY 86A, B 1.7e-152
    HMMPanther Cytochrome P450 1.7e-152
    HMMPfam Cytochrome P450 6.2e-76

    See the detailed result >

    AT2G45510.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 704, subfamily A, polypeptide 2
    Curator Summary
    member of CYP704A
    Computational Description
    "cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR