K25004

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25004

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25004

Determination of introduced cDNA(s)

  • J013132B11 - Rice Full-length cDNAs - Original: J013132B11

    full reading [+] show sequence

    Nucleotide sequence: J013132B11 - full reading
    GACACCGGCA CAGCCACACA AATCACAGCC TCCTTCAAAC CGGCAGCCGG 
    CGCCGGCTGC TGATCCTCTC CATCGCCGCC GTGGCCGTGC TGCCGGCGTG
    CCTCCAAATG ACTCCGCCCG GCAGTATCAG CACCACCTCG TCGAACCTTC
    GGGCCCAGCA AAAACCCTCA ATTCCCAAGA AACCGTGTGC TTTCGGAGCG
    CCACCGAGAC ACCTGCATCG CCCGTGCAAG AAGAACGCTG CCGTCTCGGT
    GGCGTGCACC GGGCAAGGCG AACAACGATC CAGCCCTGCC ATCGCGGCGC
    CGCAGGAGGC TCAGGCAGGC ACGTTTAGCG TCGAGTTCCG GACGCGGGAC
    GGGTGCCGGC TGGGCATCTC CAGGTACCCG GACTTCGCGT ACAACGCCCA
    GGGCGGCCGC GGCGTCGGCG TCGTCGCCAG CAGCGGCGAG GATAGTGGCA
    CGGTTCTGGT CGAGTTCGAC GTGTCAAGCC TGTACATCCC GGCGATGTCC
    GGCGCGACGA CCAAGTTCCT CGGGCTGCCG CTGCCGCCGT TCCTCAAGAT
    CGACATCTTG CCCGAGGCTC TCCGCGGAAA CATCGATCCA ACAAGTGGTC
    AGGTTGATCT GAAGTTCAGG TCGAGGTTCT GCTTCTCGGT TGGAAGCATC
    TACCGAGCAC CGCCGCTGTT CGTCGACACA ACGCTGACCT CCGAGGAGTC
    CAGTGGAGCC ATAAGACGAG GAACTGGAGA AAGGATGGAC GGCGAAGGGA
    GATGCAAGCT GGTAGGGGTG GCCGTCGTCG ACCCCATTGA TGACGTCTTC
    ATGAACACCT TCCTCAGCCT GCCGACCGAG TGCATCGCTT ACTTGAACGC
    CACCATCTCC ATCACTGAAC CAAGCTGATC TTGCCTGTTT CAGTTGGTTG
    TATAGATCTT AATGCGTGGT GAAACGCATG AATGTTGCAG GACGAAACTT
    GCACGGAAAA GAACAGACTG TACTATTGTA GTATTGGCCA AGGGAATGCC
    TCTTATTCAT

    Gene models with high sequence identity

    1. AT5G62140.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 1e-39; Score: 160.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G62140.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR