K25128

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25128

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25128

Determination of introduced cDNA(s)

  • J033125C15 - Rice Full-length cDNAs - Original: J033125C15

    full reading [+] show sequence

    Nucleotide sequence: J033125C15 - full reading 
    GAATTCAAAA TCCCCTCCGC TTCTCCTCCT CTCCCCATTC TTCTCCTGTC 
    TCTCTCGCCG CCTCCAATTC CTCCAAACCC TCATCCTCCT CCTCCGCGGC 
    GGCGGTGGCG ACGGCGGCGG CCGCATCATG GGTTGCTTCC TCTCCTGCTT 
    CCGCGGCGCG GGATCCGATC CCGCCGGTAG CCTCCGCGAT CCGCTCGTGC 
    GGGAGAGCCG GATCGGGGAG GCGTTCCTGG ACGACGAGAC GAAGGTTGAA 
    GCGAGCGGGA CGCTGGATGG GGATCGCGGA AATGGCGGAA GCGTCGACGA 
    GGAGCTCTGG CGAGAGGCAA ATTATCTGAA ATCATGTGGT GCGATAGGAG 
    AAACCCCACC AGAAATGCTG AAAGGGTCAA ACCAAATCAC TGAAGAAGAA 
    ACTAATGGGG AGCTTAAAGG AGCAGCGGTG TCTGAAGAAA ACTTATCTGA 
    AGGGTTCAAC TGTGATGAGC ATAGTGCTTT GAAACATGAA CAAAGCGATT 
    CACCTCACCC AACCCCTCTG GTTCTCAGAG GTGATATGCA AACTCCTGGT 
    ACACTGAATA CTGCATATAA GGAGTCTTTA AGGTCTGGGA AGCGTGCAAG 
    GACCAACAAG CAATTCATAT ATCCTGTCCT CAGACCTATC GAGAACAAGT 
    TACAATGGAT GGAACTAAGA GACGACTCTT CACCTATCCT GTCATTCAAT 
    CCTCCAAAGA GAAGATACTT GAGCACAGAT TGTAGCGCGA AACCTCAAGA 
    GTCCATCACA AATTCAATGG CTACGCAAAC AGCGCGAATA ACTCCTGCTT 
    CCTTCTCATT TCATGACATT ACTGCAGGGC AAGATCAAGG AGTGATATCT 
    CCGGAGGAAC ATAAGAGTGA GAATGACAGC AGAAAGCTGT TAGATGATGC 
    AGATCAATTG AAATACAACG CAGACAGTGA GAGGAAGGGT GTTGCAAGCC 
    TTTCTTGCTG GCTTAAGCCT CCATCTTCAG CTGGTGGGAG TCAAAGTGAC 
    ACGGAGGGCA AGGTGGTAAA GCAAAGATGC TACGAGAATA GTGTTTTCAC 
    AGACCTGCCT ATCTTTACAG CTTCTGGTCT GAACTGGGAC AATGACAAGC 
    CTACTCCTGT GTTGCCAAAG GTGTGGGATG GTAACGGTAT CCCAAACACA 
    ACTACCAAAT ACAAGGAGGA CCAGAAAGTC AGTTGGCACG CAACGCCTTT 
    TGAGGAAAGG CTGATGAAAG TTCTGTCCGA TGAGAAACCG CATCATCAAA 
    GGAAAATCAG CGGAAAGCTG ATCCAACTTG ATGAAGAGAC CAACTGAAGA 
    CCCTTGCAAG AAGACCATCA TCCTCGTAGC ATTTGCATCA TCATCATCAT 
    CCTTGAAACA GTGAATTTTT TGAAAGGGCC CCAGCTTTGG CTAATCTGAT 
    ATGGACTCTA GCTACAAGCT GCGCATCTTG TCATCTGTAC AGCATTCGCA 
    AATAGGGTGT CTGAGCTACA TTCTCGTCAA ATTTCATTTC GGACCGTTAT 
    TGCCAAGTTG TCAACTTAAG TTGTCGTTTG CAACTTTTTG TTTTCCTCTG 
    TAAAGAAGAT GATACTTTAT CTGCTGTGAA CATCAACTGC CGACTGGAGT 
    TTGATAGTAG TATCAATGAA AGAAAACTTC TCGTGT

    Gene models with high sequence identity

    1. AT1G06660.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); ...
      E-value: 1e-23; Score: 108.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G06660.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR